RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 IKZF3Q9UKT9 509 aa5.96□□□□□ -1.45
CNOT1-204ENST00000563130 PDE10AQ9Y233 779 aa5.96□□□□□ -1.45
CNOT1-204ENST00000563130 TMA7Q9Y2S6 64 aaKnown RBP5.96□□□□□ -1.45
CNOT1-204ENST00000563130 TMEM184BQ9Y519 407 aaPredicted RBP5.96□□□□□ -1.45
CNOT1-204ENST00000563130 USP24Q9UPU5 2620 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 EPG5Q9HCE0 2579 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 A0A0J9YY10 115 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 ISM1B1AKI9 464 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 H3BMH7 237 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 ACSL3O95573 720 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 DLGAP3O95886 979 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 ABHD2P08910 425 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 ENO2P09104 434 aaPredicted RBP5.96□□□□□ -1.46
CNOT1-204ENST00000563130 EBLN1P0CF75 366 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 LIPCP11150 499 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 OAS2P29728 719 aaKnown RBP5.96□□□□□ -1.46
CNOT1-204ENST00000563130 SERPINB4P48594 390 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 PNLIPRP1P54315 467 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 TUBB4BP68371 445 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 ACY1Q03154 408 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 ST3GAL2Q16842 350 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 TEX35Q5T0J7 233 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 CYB5D1Q6P9G0 228 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 CDHR3Q6ZTQ4 885 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 TRMT10CQ7L0Y3 403 aaKnown RBP5.96□□□□□ -1.46
CNOT1-204ENST00000563130 TRIM73Q86UV7 250 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 RAB42Q8N4Z0 105 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 NKAPQ8N5F7 415 aaKnown RBP5.96□□□□□ -1.46
CNOT1-204ENST00000563130 C2orf73Q8N5S3 287 aaPredicted RBP5.96□□□□□ -1.46
CNOT1-204ENST00000563130 OR2L3Q8NG85 312 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 MCOLN3Q8TDD5 553 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 SLC44A1Q8WWI5 657 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.96□□□□□ -1.46
CNOT1-204ENST00000563130 SMPDL3AQ92484 453 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 TCTN2Q96GX1 697 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 CCDC138Q96M89 665 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 GPAMQ9HCL2 828 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 PDE7BQ9NP56 450 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 ENAMQ9NRM1 1142 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 FGF21Q9NSA1 209 aa5.96□□□□□ -1.46
CNOT1-204ENST00000563130 NOVA2Q9UNW9 492 aaKnown RBP5.96□□□□□ -1.46
CNOT1-204ENST00000563130 ZZEF1O43149 2961 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 SDK2Q58EX2 2172 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 CDC14CA4D256 554 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 TARM1B6A8C7 271 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 STMND1H3BQB6 276 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 PHGDHO43175 533 aaKnown RBP5.95□□□□□ -1.46
CNOT1-204ENST00000563130 RIPK2O43353 540 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 HCRTR1O43613 425 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 SLU7O95391 586 aaKnown RBP5.95□□□□□ -1.46
CNOT1-204ENST00000563130 TIAF1O95411 115 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 SLC35E2BP0CK96 405 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 STMN1P16949 149 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 CYP2A7P20853 494 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 MAGP20916 626 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 SAT1P21673 171 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 MAP4P27816 1152 aaKnown RBP5.95□□□□□ -1.46
CNOT1-204ENST00000563130 PSMB5P28074 263 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 SLC26A3P40879 764 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 AP1S2P56377 157 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 RAB10P61026 200 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 YBX1P67809 324 aaKnown RBP5.95□□□□□ -1.46
CNOT1-204ENST00000563130 FOXM1Q08050 763 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 TUBB3Q13509 450 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 USP10Q14694 798 aaKnown RBP5.95□□□□□ -1.46
CNOT1-204ENST00000563130 SF1Q15637 639 aaKnown RBP5.95□□□□□ -1.46
CNOT1-204ENST00000563130 TMTC4Q5T4D3 741 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 KIAA1614Q5VZ46 1190 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 TAX1BP1Q86VP1 789 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 ZFAND4Q86XD8 727 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 PPP1R3BQ86XI6 285 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 FAM20CQ8IXL6 584 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 VWA5B2Q8N398 1253 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 C19orf47Q8N9M1 422 aaKnown RBP5.95□□□□□ -1.46
CNOT1-204ENST00000563130 OR8K5Q8NH50 307 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 ISL2Q96A47 359 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 ZUFSPQ96AP4 578 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 TSPAN17Q96FV3 270 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 DHRS4Q9BTZ2 278 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 DPH1Q9BZG8 443 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 DERL2Q9GZP9 239 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 KLHL25Q9H0H3 589 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 STOX2Q9P2F5 926 aaPredicted RBP5.95□□□□□ -1.46
CNOT1-204ENST00000563130 ZNF180Q9UJW8 692 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 RARRES3Q9UL19 164 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 CFAP47Q6ZTR5 3102 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 A0A087WUV0 522 aaPredicted RBP5.95□□□□□ -1.46
CNOT1-204ENST00000563130 IGKV1-8A0A0C4DH67 115 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 ZNF839A8K0R7 811 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 CDC7O00311 574 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 STK17BO94768 372 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 ALDOAP04075 364 aaKnown RBP5.95□□□□□ -1.46
CNOT1-204ENST00000563130 HIST1H2AGP0C0S8 130 aaPredicted RBP5.95□□□□□ -1.46
CNOT1-204ENST00000563130 CD1DP15813 335 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 ZNF28P17035 718 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 HIST1H2ADP20671 130 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 MSX1P28360 303 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 GRIA3P42263 894 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 MAGEA12P43365 314 aa5.95□□□□□ -1.46
CNOT1-204ENST00000563130 ARL4DP49703 201 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms