RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 C3orf18Q9UK00 162 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 ABCA12Q86UK0 2595 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 SVILO95425 2214 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 LOC105369274A0A096LPK9 316 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 NSG1A0A0A6YYJ2 146 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 TRAV17A0A0B4J275 112 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 LOC102723532A0A0G2JNH3 316 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 A0A0J9YVX5 310 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 DYTNA2CJ06 578 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 MIF4GDA9UHW6 222 aaKnown RBP11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 PRMT5O14744 637 aaPredicted RBP11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 KPNA5O15131 536 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 C1orf105O95561 183 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 COX6A1P12074 109 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 POU3F2P20265 443 aaPredicted RBP11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 SOX11P35716 441 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 TTPAP49638 278 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 PRAMEP78395 509 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 NAA25Q14CX7 972 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 MUM1Q2TAK8 710 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 FRMPD2BQ6IN97 320 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 PPP1R21Q6ZMI0 780 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 RNF44Q7L0R7 432 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 NDUFAF7Q7L592 441 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 PEX26Q7Z412 305 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 OR4N4Q8N0Y3 316 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 KRT222Q8N1A0 295 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 DTWD1Q8N5C7 304 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 TAB3Q8N5C8 712 aaPredicted RBP11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 MYRIPQ8NFW9 859 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 OR2A1Q8NGT9 310 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 GSDMBQ8TAX9 411 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 C16orf45Q96MC5 204 aaPredicted RBP11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 PHF12Q96QT6 1004 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 PANX3Q96QZ0 392 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 TAAR6Q96RI8 345 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 MESP1Q9BRJ9 268 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 LACRTQ9GZZ8 138 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 ETNK1Q9HBU6 452 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 ZC3H7BQ9UGR2 993 aaKnown RBP11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 ANAPC5Q9UJX4 755 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 AMFRQ9UKV5 643 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 TTC7AQ9ULT0 858 aaPredicted RBP11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 CDC14AQ9UNH5 594 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 R3HDM2Q9Y2K5 976 aaKnown RBP11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 REXO2Q9Y3B8 237 aaKnown RBP11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 TCAF1Q9Y4C2 921 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 KLF2Q9Y5W3 355 aaPredicted RBP11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 CRYBG3Q68DQ2 2970 aa11.28□□□□□ -0.6
CARMIL3-204ENST00000561354 A0A1W2PPV9 198 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 OR2A25A4D2G3 310 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 SOWAHDA6NJG2 315 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 BMP10O95393 424 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 SERPINA7P05543 415 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 CCDC175P0C221 793 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 PRR35P0CG20 571 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 CXCR2P25025 360 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 PSMB5P28074 263 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 FDFT1P37268 417 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 CCNFP41002 786 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 GRIA1P42261 906 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 PRTGQ2VWP7 1150 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 VWA2Q5GFL6 755 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 PTRHD1Q6GMV3 140 aaKnown RBP11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 FBXO42Q6P3S6 717 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 RIPOR1Q6ZS17 1223 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 LAPTM4BQ86VI4 370 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 LRRC6Q86X45 466 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 MCEMP1Q8IX19 187 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 KIF18AQ8NI77 898 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 MAGEC3Q8TD91 643 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 BRIX1Q8TDN6 353 aaKnown RBP11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 C8orf44Q96CB5 159 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 MVB12AQ96EY5 273 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 MAGEB10Q96LZ2 347 aaPredicted RBP11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 MIPEPQ99797 713 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 ZFYVE21Q9BQ24 234 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 P2RY12Q9H244 342 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 CATSPERZQ9NTU4 200 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 PTGFRNQ9P2B2 879 aa11.27□□□□□ -0.61
CARMIL3-204ENST00000561354 IGHV1-45A0A0A0MS14 117 aa11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 TCRBV7S2A1N4TA0A589 114 aa11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 IDSB3KWA1 339 aa11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 E7EVH7 732 aa11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 DYNC1I1O14576 645 aa11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 CD3EAPO15446 510 aaKnown RBP11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 PRPF4O43172 522 aaKnown RBP eCLIP11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 PHF2O75151 1096 aa11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 EIF2S1P05198 315 aaKnown RBP11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 FBLP22087 321 aaKnown RBP11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 RPS3P23396 243 aaKnown RBP eCLIP11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 EMP2P54851 167 aa11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 KCNK10P57789 538 aa11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 DSG2Q14126 1118 aa11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 OASLQ15646 514 aaKnown RBP11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 CCSMST1Q4G0I0 132 aa11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 CNSTQ6PJW8 725 aa11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 GFRALQ6UXV0 394 aa11.26□□□□□ -0.61
CARMIL3-204ENST00000561354 OTOAQ7RTW8 1153 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms