RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 SLC4A4Q9Y6R1 1079 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 COMMD3-BMI1R4GMX3 469 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 PLEKHG2Q9H7P9 1386 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ZNF536O15090 1300 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 A0A087X0K7 114 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 A0A0A0MQY5 61 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 GOLGA6L7A0A1B0GV03 622 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 TMEM129A0AVI4 362 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 ESYT2A0FGR8 921 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 MED19A0JLT2 244 aaPredicted RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 GAGE12BA1L429 117 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 GAGE12HA6NDE8 117 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 NEMP2A6NFY4 417 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 TMEM221A6NGB7 291 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 SLC15A5A6NIM6 579 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 ACOD1A6NK06 481 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 C15orf62A8K5M9 175 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 KCNU1A8MYU2 1149 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 ZNF879B4DU55 563 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 H0YGN5 161 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 J3QR06 171 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 M0R296 226 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 RHODO00212 210 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 NDUFS8O00217 210 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 PPP6CO00743 305 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 CHEK1O14757 476 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 ANKRD28O15084 1053 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 WIPF1O43516 503 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 PLPP2O43688 288 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 LCMT2O60294 686 aaKnown RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 CACNG3O60359 315 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 NME2P1O60361 137 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 CIDEAO60543 219 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 NMT2O60551 498 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 TPST2O60704 377 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 DNAJB6O75190 326 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 CSO75390 466 aaKnown RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 ZNF821O75541 412 aaPredicted RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 SYNGR4O95473 234 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 CPNE6O95741 557 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 MBD3O95983 291 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 WNT11O96014 354 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 ITGB3P05106 788 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 CHRNGP07510 517 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 HMBSP08397 361 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 SLC2A3P11169 496 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 ST6GAL1P15907 406 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 ITGB6P18564 788 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 CYP11B2P19099 503 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 TNNI1P19237 187 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 FUT1P19526 365 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 DRD5P21918 477 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 PSMA2P25787 234 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 PTBP1P26599 531 aaKnown RBP eCLIP1.96□□□□□ -2.1
RTF1-207ENST00000561076 DPP4P27487 766 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 HTR2AP28223 471 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 AXLP30530 894 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 HIBADHP31937 336 aaKnown RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 TAGLN2P37802 199 aaKnown RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 ABCG1P45844 678 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 ENTPD1P49961 510 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 HTR6P50406 440 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 CLCNKAP51800 687 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 BLVRAP53004 296 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 RAD23BP54727 409 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 OSTNP61366 133 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 RPL23AP62750 156 aaKnown RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 GUCY1B3Q02153 619 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 CFHR1Q03591 330 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 MESP2Q0VG99 397 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 TRDNQ13061 729 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 MYBPHQ13203 477 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 SRSF5Q13243 272 aaKnown RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 STIM1Q13586 685 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 VEZF1Q14119 521 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 PDIA5Q14554 519 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 MVPQ14764 893 aaKnown RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 PTPAQ15257 358 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 KCNA10Q16322 511 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 C2orf68Q2NKX9 166 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 CTU2Q2VPK5 515 aaKnown RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 LRIT3Q3SXY7 679 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 KRT71Q3SY84 523 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 CFAP221Q4G0U5 840 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 SYTL3Q4VX76 610 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 ZC2HC1CQ53FD0 456 aaPredicted RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 LACTB2Q53H82 288 aaPredicted RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 LBHQ53QV2 105 aaPredicted RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 SPANXN2Q5MJ10 180 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 AKNAD1Q5T1N1 836 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 ATF7IP2Q5U623 682 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 FAM69BQ5VUD6 431 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 AP1ARQ63HQ0 302 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 SEL1L3Q68CR1 1132 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 HIST2H2AA3Q6FI13 130 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 TMEM225Q6GV28 225 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 DUS1LQ6P1R4 473 aaKnown RBP1.96□□□□□ -2.1
RTF1-207ENST00000561076 FBXO42Q6P3S6 717 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 DOK6Q6PKX4 331 aa1.96□□□□□ -2.1
RTF1-207ENST00000561076 CWC27Q6UX04 472 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms