RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 TXLNGQ9NUQ3 528 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 SPATA7Q9P0W8 599 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.3■□□□□ 0.04
LMX1B-204ENST00000561065 IFT80Q9P2H3 777 aaPredicted RBP15.3■□□□□ 0.04
LMX1B-204ENST00000561065 ZC3H7BQ9UGR2 993 aaKnown RBP15.3■□□□□ 0.04
LMX1B-204ENST00000561065 PTRH2Q9Y3E5 179 aaKnown RBP15.3■□□□□ 0.04
LMX1B-204ENST00000561065 KLK4Q9Y5K2 254 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 DOCK10Q96BY6 2186 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 LRRK2Q5S007 2527 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 KIF2AO00139 706 aaPredicted RBP15.29■□□□□ 0.04
LMX1B-204ENST00000561065 EIF3FO00303 357 aaPredicted RBP15.29■□□□□ 0.04
LMX1B-204ENST00000561065 PSIP1O75475 530 aaKnown RBP15.29■□□□□ 0.04
LMX1B-204ENST00000561065 CATP04040 527 aaKnown RBP15.29■□□□□ 0.04
LMX1B-204ENST00000561065 IVDP26440 423 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 RGS4P49798 205 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 ITGA8P53708 1063 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 MPP1Q00013 466 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 CAV1Q03135 178 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 DHX9Q08211 1270 aaKnown RBP15.29■□□□□ 0.04
LMX1B-204ENST00000561065 CUL1Q13616 776 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 CRYMQ14894 314 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 CYP2A13Q16696 494 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 KLHL38Q2WGJ6 581 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 FRMPD2BQ6IN97 320 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 HIBCHQ6NVY1 386 aaPredicted RBP15.29■□□□□ 0.04
LMX1B-204ENST00000561065 TTLL10Q6ZVT0 673 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 RNF44Q7L0R7 432 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 PPP1R32Q7Z5V6 425 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 RAB43Q86YS6 212 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 OR2Y1Q8NGV0 311 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 INPP5DQ92835 1189 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 TRIM44Q96DX7 344 aaPredicted RBP15.29■□□□□ 0.04
LMX1B-204ENST00000561065 ERP44Q9BS26 406 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 NDC1Q9BTX1 674 aa15.29■□□□□ 0.04
LMX1B-204ENST00000561065 NBPF19A0A087WUL8 3843 aa15.28■□□□□ 0.04
LMX1B-204ENST00000561065 IGKV1-8A0A0C4DH67 115 aa15.28■□□□□ 0.04
LMX1B-204ENST00000561065 A0A1B0GX78 115 aa15.28■□□□□ 0.04
LMX1B-204ENST00000561065 FITM1A5D6W6 292 aa15.28■□□□□ 0.04
LMX1B-204ENST00000561065 PABPN1LA6NDY0 278 aaKnown RBP15.28■□□□□ 0.04
LMX1B-204ENST00000561065 MYO1CO00159 1063 aa15.28■□□□□ 0.04
LMX1B-204ENST00000561065 ZBTB14O43829 449 aa15.28■□□□□ 0.04
LMX1B-204ENST00000561065 BANF1O75531 89 aa15.28■□□□□ 0.04
LMX1B-204ENST00000561065 SORBS2O94875 1100 aaKnown RBP15.28■□□□□ 0.04
LMX1B-204ENST00000561065 SEC31AO94979 1220 aaKnown RBP15.28■□□□□ 0.04
LMX1B-204ENST00000561065 FOLR3P41439 243 aa15.28■□□□□ 0.04
LMX1B-204ENST00000561065 SRSF1Q07955 248 aaKnown RBP eCLIP15.28■□□□□ 0.04
LMX1B-204ENST00000561065 RAPSNQ13702 412 aa15.28■□□□□ 0.04
LMX1B-204ENST00000561065 MED25Q71SY5 747 aa15.28■□□□□ 0.04
LMX1B-204ENST00000561065 METTL27Q8N6F8 245 aaPredicted RBP15.28■□□□□ 0.04
LMX1B-204ENST00000561065 TMEM102Q8N9M5 508 aaPredicted RBP15.28■□□□□ 0.04
LMX1B-204ENST00000561065 SPSB2Q99619 263 aa15.28■□□□□ 0.04
LMX1B-204ENST00000561065 C17orf62Q9BQA9 187 aa15.28■□□□□ 0.04
LMX1B-204ENST00000561065 TRIM31Q9BZY9 425 aa15.28■□□□□ 0.04
LMX1B-204ENST00000561065 IARS2Q9NSE4 1012 aaKnown RBP15.28■□□□□ 0.04
LMX1B-204ENST00000561065 CUTCQ9NTM9 273 aa15.28■□□□□ 0.04
LMX1B-204ENST00000561065 NSMCE4AQ9NXX6 385 aa15.28■□□□□ 0.04
LMX1B-204ENST00000561065 UTP6Q9NYH9 597 aaKnown RBP15.28■□□□□ 0.04
LMX1B-204ENST00000561065 TAS2R13Q9NYV9 303 aa15.28■□□□□ 0.04
LMX1B-204ENST00000561065 WHRNQ9P202 907 aa15.28■□□□□ 0.04
LMX1B-204ENST00000561065 NDOR1Q9UHB4 597 aa15.28■□□□□ 0.04
LMX1B-204ENST00000561065 CORO1CQ9ULV4 474 aaPredicted RBP15.28■□□□□ 0.04
LMX1B-204ENST00000561065 USP9XQ93008 2570 aaPredicted RBP15.28■□□□□ 0.04
LMX1B-204ENST00000561065 LOC105369274A0A096LPK9 316 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 LOC102723532A0A0G2JNH3 316 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 OR2A25A4D2G3 310 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 CLEC18AA5D8T8 446 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 A6NL46 340 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 DSCR3O14972 297 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 ONECUT2O95948 504 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 CD63P08962 238 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 CD97P48960 835 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 SSPNQ14714 243 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 PRR30Q53SZ7 412 aaPredicted RBP15.27■□□□□ 0.04
LMX1B-204ENST00000561065 ZC3H12BQ5HYM0 836 aaKnown RBP15.27■□□□□ 0.04
LMX1B-204ENST00000561065 SUSD1Q6UWL2 747 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 CLEC18BQ6UXF7 455 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 GALNT7Q86SF2 657 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 OR4N4Q8N0Y3 316 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 Q8NA96 180 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 CLEC18CQ8NCF0 446 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 OR9A1PQ8NGU1 263 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 CD200R1Q8TD46 325 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 DLG3Q92796 817 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 ZUFSPQ96AP4 578 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 PKP4Q99569 1192 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 SELENOSQ9BQE4 189 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 ACAT2Q9BWD1 397 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 LUZP4Q9P127 313 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 CTSFQ9UBX1 484 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 GPN3Q9UHW5 284 aaPredicted RBP15.27■□□□□ 0.04
LMX1B-204ENST00000561065 TRMT6Q9UJA5 497 aaKnown RBP15.27■□□□□ 0.04
LMX1B-204ENST00000561065 DHRS7Q9Y394 339 aa15.27■□□□□ 0.04
LMX1B-204ENST00000561065 A0A0J9YVX5 310 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 TARM1B6A8C7 271 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 EIF3HO15372 352 aaKnown RBP eCLIP15.26■□□□□ 0.03
LMX1B-204ENST00000561065 MPC1LP0DKB6 136 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 ALAS2P22557 587 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 ELK3P41970 407 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 VSX2P58304 361 aaPredicted RBP15.26■□□□□ 0.03
LMX1B-204ENST00000561065 PDIA2Q13087 525 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms