RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 SLC6A2P23975 617 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 CLCNKAP51800 687 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 SLC7A2P52569 658 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 CLDN8P56748 225 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 TRAP1Q12931 704 aaKnown RBP12.48□□□□□ -0.41
SNX1-211ENST00000560829 NFYCQ13952 458 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 FLOT2Q14254 428 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 TRIM25Q14258 630 aaKnown RBP12.48□□□□□ -0.41
SNX1-211ENST00000560829 SKIV2LQ15477 1246 aaKnown RBP12.48□□□□□ -0.41
SNX1-211ENST00000560829 LEXMQ3ZCV2 418 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 TMPRSS11BQ86T26 416 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.48□□□□□ -0.41
SNX1-211ENST00000560829 LAS2Q8IYD9 372 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 SYNPOQ8N3V7 929 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 OR7G3Q8NG95 312 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 SLC5A11Q8WWX8 675 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 HLA-CQ95604 372 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 REPS1Q96D71 796 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 C11orf24Q96F05 449 aaPredicted RBP12.48□□□□□ -0.41
SNX1-211ENST00000560829 APIPQ96GX9 242 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 LRCH3Q96II8 777 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 ZBTB18Q99592 522 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 SLC39A3Q9BRY0 314 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 DPY30Q9C005 99 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 FGF22Q9HCT0 170 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 POLMQ9NP87 494 aaPredicted RBP12.48□□□□□ -0.41
SNX1-211ENST00000560829 VPS29Q9UBQ0 182 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 EBF1Q9UH73 591 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 DLGAP4Q9Y2H0 992 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 TSC22D4Q9Y3Q8 395 aa12.48□□□□□ -0.41
SNX1-211ENST00000560829 BRWD1Q9NSI6 2320 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 POM121BA6NF01 834 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 ANP32DO95626 131 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 IL6P05231 212 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 ANPEPP15144 967 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 DGKEP52429 567 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 LAPTM5Q13571 262 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 NFATC4Q14934 902 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 PAGE2BQ5JRK9 111 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 PRAMEF14Q5SWL7 426 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 PRAMEF13Q5VWM6 474 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 MED27Q6P2C8 311 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 NXPE4Q6UWF7 544 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 ZNF852Q6ZMS4 543 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 SLC15A3Q8IY34 581 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 RNF148Q8N7C7 305 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 SLC26A7Q8TE54 656 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 BMFQ96LC9 184 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 HHIPQ96QV1 700 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 INSM2Q96T92 566 aaPredicted RBP12.47□□□□□ -0.41
SNX1-211ENST00000560829 HAUS8Q9BT25 410 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 ANGPTL2Q9UKU9 493 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 NDRG2Q9UN36 371 aaKnown RBP12.47□□□□□ -0.41
SNX1-211ENST00000560829 DUSP12Q9UNI6 340 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 SH2B3Q9UQQ2 575 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 WDR37Q9Y2I8 494 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 PCDHA9Q9Y5H5 950 aa12.47□□□□□ -0.41
SNX1-211ENST00000560829 C15orf38-AP3S2A0A0A6YYH1 394 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 PRSS38A1L453 326 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 FOXE1O00358 373 aaPredicted RBP12.46□□□□□ -0.41
SNX1-211ENST00000560829 NME4O00746 187 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 TOR1BO14657 336 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 APBB3O95704 486 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 HSD17B1P14061 328 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 SDC1P18827 310 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 IDSP22304 550 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 RPL10P27635 214 aaKnown RBP12.46□□□□□ -0.41
SNX1-211ENST00000560829 PTDSS1P48651 473 aaKnown RBP12.46□□□□□ -0.41
SNX1-211ENST00000560829 YPEL5P62699 121 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 HABP4Q5JVS0 413 aaKnown RBP12.46□□□□□ -0.41
SNX1-211ENST00000560829 CATSPEREQ5SY80 951 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 Q6ZS52 159 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 LPCAT2Q7L5N7 544 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 SYT13Q7L8C5 426 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 ARPINQ7Z6K5 226 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 IL17FQ96PD4 163 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 MYOCQ99972 504 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 PCBD2Q9H0N5 130 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 GEMIN8Q9NWZ8 242 aaKnown RBP12.46□□□□□ -0.41
SNX1-211ENST00000560829 CMTM6Q9NX76 183 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 KCNK6Q9Y257 313 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 TRPM6Q9BX84 2022 aa12.46□□□□□ -0.41
SNX1-211ENST00000560829 TNFRSF10CO14798 259 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 SEMA4FO95754 770 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 CLNS1AP54105 237 aaKnown RBP12.46□□□□□ -0.42
SNX1-211ENST00000560829 CLDN2P57739 230 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 C21orf58P58505 322 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 PRKCQQ04759 706 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 SLBPQ14493 270 aaKnown RBP eCLIP12.46□□□□□ -0.42
SNX1-211ENST00000560829 UAP1L1Q3KQV9 507 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 WLSQ5T9L3 541 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 NOXRED1Q6NXP6 359 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 SLC2A7Q6PXP3 512 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 DLEU7Q6UYE1 221 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 DHDDSQ86SQ9 333 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 RIMKLAQ8IXN7 391 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 LMNTD1Q8N9Z9 388 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 HUS1BQ8NHY5 278 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 HMGB4Q8WW32 186 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 SLC13A3Q8WWT9 602 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms