RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 CEACAM7Q14002 265 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 KNOP1Q1ED39 458 aaKnown RBP6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 ZFP69Q49AA0 526 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 ESCO2Q56NI9 601 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 MTX3Q5HYI7 312 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 MAVSQ7Z434 540 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 SERPINA12Q8IW75 414 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 DSELQ8IZU8 1212 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 PACRGLQ8N7B6 248 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 ANKFN1Q8N957 763 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 C7orf57Q8NEG2 295 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 SLC44A1Q8WWI5 657 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 ZNF558Q96NG5 402 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 ZSCAN5AQ9BUG6 496 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 DPH1Q9BZG8 443 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 TRPV6Q9H1D0 765 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 IKZF4Q9H2S9 585 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 UNKLQ9H9P5 680 aaKnown RBP6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 TM9SF3Q9HD45 589 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 DDX28Q9NUL7 540 aaKnown RBP6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 SMOXQ9NWM0 555 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 SMPD3Q9NY59 655 aaPredicted RBP6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 SLC25A10Q9UBX3 287 aaPredicted RBP6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 ATP6V1HQ9UI12 483 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 PPIEQ9UNP9 301 aaKnown RBP6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 RIPK3Q9Y572 518 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 TEX264Q9Y6I9 313 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 PDXKO00764 312 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 CYB561D2O14569 222 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 TERTO14746 1132 aaKnown RBP6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 DCXO43602 365 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 BCAS1O75363 584 aaPredicted RBP6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 AK1P00568 194 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 COL2A1P02458 1487 aaPredicted RBP6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 ALPPP05187 535 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 ZSCAN5DPP0CG00 497 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 ALPPL2P10696 532 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 NCF2P19878 526 aaPredicted RBP6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 BMP8BP34820 402 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 HTR2BP41595 481 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 BNIP2Q12982 314 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 AQP6Q13520 282 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 MAPRE2Q15555 327 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 BRMS1LQ5PSV4 323 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 FAM182AQ5T1J6 154 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 AGAP6Q5VW22 663 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 STEAP3Q658P3 488 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 ETFRF1Q6IPR1 90 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 FSTL5Q8N475 847 aaPredicted RBP6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 HDDC3Q8N4P3 179 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 CDYL2Q8N8U2 506 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 BPIFB6Q8NFQ5 453 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 SNIP1Q8TAD8 396 aaKnown RBP6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 RNFT2Q96EX2 444 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 BTN2A3PQ96KV6 586 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 AGAP4Q96P64 663 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 CPVLQ9H3G5 476 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 VAT1LQ9HCJ6 419 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 CYP4F12Q9HCS2 524 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 FBXL17Q9UF56 701 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 GMEB2Q9UKD1 530 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 CDYLQ9Y232 598 aa6.56□□□□□ -1.36
TSPAN3-209ENST00000560715 MN1Q10571 1320 aaPredicted RBP6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 A0A1W2PQF6 199 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 OR2A25A4D2G3 310 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 C16orf96A6NNT2 1141 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 ZNF785A8K8V0 405 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 DLGAP1O14490 977 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 SOCS2O14508 198 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 AIM2O14862 343 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 GAS2O43903 313 aaKnown RBP6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 USP12O75317 370 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 OR7A10O76100 309 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 PRSS23O95084 383 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 CCNDBP1O95273 360 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 PTTG1O95997 202 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 ALBP02768 609 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 NR3C1P04150 777 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 ETS1P14921 441 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 PFKLP17858 780 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 GABRB1P18505 474 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 ATF6P18850 670 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 CYP2A7P20853 494 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 ACVR2AP27037 513 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 CD40LGP29965 261 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 EVI2BP34910 448 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 POLR2IP36954 125 aaKnown RBP6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 CAPZA1P52907 286 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 CARD18P57730 90 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 GHRHRQ02643 423 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 NFIAQ12857 509 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 MERTKQ12866 999 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 CALCRLQ16602 461 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 SLC36A3Q495N2 470 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 ZNF468Q5VIY5 522 aaPredicted RBP6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 INO80CQ6PI98 192 aaPredicted RBP6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 ZNF773Q6PK81 442 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 ZNF600Q6ZNG1 722 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 SLCO6A1Q86UG4 719 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms