RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 PIANPQ8IYJ0 282 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 DNAAF3Q8N9W5 541 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 CHDHQ8NE62 594 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 ELMO1Q92556 727 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 VAT1Q99536 393 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 VKORC1Q9BQB6 163 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 HES7Q9BYE0 225 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 DLL4Q9NR61 685 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 INTS7Q9NVH2 962 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 CIDEBQ9UHD4 219 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 LCMT1Q9UIC8 334 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 ZANQ9Y493 2812 aa12.17□□□□□ -0.46
RABGGTA-213ENST00000560127 LOC105369274A0A096LPK9 316 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 LOC102723532A0A0G2JNH3 316 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 ASPDHA6ND91 283 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 AKR1B15C9JRZ8 316 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 TTI1O43156 1089 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 KDM1AO60341 852 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 SRPX2O60687 465 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 SLCO2B1O94956 709 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 AP2A2O94973 939 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 CRTAMO95727 393 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 ABOP16442 354 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 CD9P21926 228 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 FBLP22087 321 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 EFNA3P52797 238 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 GEMP55040 296 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 PPP2R2AP63151 447 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 HSF1Q00613 529 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 FOXD4Q12950 439 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 GRB7Q14451 532 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 DBN1Q16643 649 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 TAS2R42Q7RTR8 314 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 TMEM200AQ86VY9 491 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 OR4N4Q8N0Y3 316 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 MDS2Q8NDY4 140 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 SLC22A18Q96BI1 424 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 DNAJC1Q96KC8 554 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 IMMP1LQ96LU5 166 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 C10orf90Q96M02 699 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 IL17FQ96PD4 163 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 SIGLEC12Q96PQ1 595 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 C19orf43Q9BQ61 176 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 TRIM51Q9BSJ1 452 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 ZNF700Q9H0M5 742 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 NHEJ1Q9H9Q4 299 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 KLHL1Q9NR64 748 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 ZC3H7BQ9UGR2 993 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 PPT2Q9UMR5 302 aa12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 RPH3AQ9Y2J0 694 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-213ENST00000560127 FOXO6A8MYZ6 492 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 ASNA1O43681 348 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 NRP2O60462 931 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 CST8O60676 142 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 MLYCDO95822 493 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 S1PR4O95977 384 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 H2AFZP0C0S5 128 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 CDKN2BP42772 138 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 ST13P50502 369 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 AP2B1P63010 937 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 TFF3Q07654 80 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 SF1Q15637 639 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 TAZQ16635 292 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 FCRLBQ6BAA4 426 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 TMEM205Q6UW68 189 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 H2AFVQ71UI9 128 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 FGD2Q7Z6J4 655 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 TMEM139Q8IV31 216 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 CNGA4Q8IV77 575 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 DMRTC2Q8IXT2 367 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 BEST3Q8N1M1 668 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 ZUFSPQ96AP4 578 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 SCMH1Q96GD3 660 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 FRMD6Q96NE9 622 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 ZNF559Q9BR84 538 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 GBA3Q9H227 469 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 CCM2LQ9NUG4 571 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 SMARCAL1Q9NZC9 954 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 COQ3Q9NZJ6 369 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 TRPC4Q9UBN4 977 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 TEKT2Q9UIF3 430 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 TRHDEQ9UKU6 1024 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 TFR2Q9UP52 801 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 ASB1Q9Y576 335 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 NBEAL1Q6ZS30 2694 aa12.15□□□□□ -0.46
RABGGTA-213ENST00000560127 A0A0J9YVX5 310 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 NKX2-6A6NCS4 301 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 A8MUI8 341 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 TARM1B6A8C7 271 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 H7C0S8 307 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 ANXA9O76027 345 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 TSPAN12O95859 305 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 FTH1P02794 183 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 HEXBP07686 556 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 ICAM2P13598 275 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 TUBA3CQ13748 450 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 DSG2Q14126 1118 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 TFDP2Q14188 446 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 MUM1Q2TAK8 710 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 SYTL3Q4VX76 610 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms