RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 UBE2FQ969M7 185 aa18.66■□□□□ 0.58
SEMA4B-215ENST00000560089 C18orf25Q96B23 403 aaPredicted RBP18.66■□□□□ 0.58
SEMA4B-215ENST00000560089 PHF21AQ96BD5 680 aa18.66■□□□□ 0.58
SEMA4B-215ENST00000560089 FAM149B1Q96BN6 582 aa18.66■□□□□ 0.58
SEMA4B-215ENST00000560089 GFM1Q96RP9 751 aaKnown RBP18.66■□□□□ 0.58
SEMA4B-215ENST00000560089 DPCDQ9BVM2 203 aaPredicted RBP18.66■□□□□ 0.58
SEMA4B-215ENST00000560089 KATNBL1Q9H079 304 aa18.66■□□□□ 0.58
SEMA4B-215ENST00000560089 SMPD4Q9NXE4 827 aa18.66■□□□□ 0.58
SEMA4B-215ENST00000560089 NSMCE4AQ9NXX6 385 aa18.66■□□□□ 0.58
SEMA4B-215ENST00000560089 UBQLN2Q9UHD9 624 aa18.66■□□□□ 0.58
SEMA4B-215ENST00000560089 LINC00587B1AMM8 73 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 GSTA4O15217 222 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 FABP7O15540 132 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 HSMCR30P0CW71 290 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 SMPD1P17405 629 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 MTPNP58546 118 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 ELP6Q0PNE2 266 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 RPA4Q13156 261 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 LARS2Q15031 903 aaKnown RBP18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 LTB4RQ15722 352 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 GRIK4Q16099 956 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 DUSP6Q16828 381 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 ATOH1Q92858 354 aaPredicted RBP18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 AHCYL2Q96HN2 611 aaKnown RBP18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 KATNAL1Q9BW62 490 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 MGAT4AQ9UM21 535 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 DNAJC15Q9Y5T4 150 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 TRAV19A0A0A6YYK7 116 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 WWP2O00308 870 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 STAU1O95793 577 aaKnown RBP18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 TSPAN12O95859 305 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 CSF3P09919 207 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 DIO3P55073 304 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 RCAN2Q14206 197 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 PDZK1Q5T2W1 519 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 SMYD5Q6GMV2 418 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 CYP4Z1Q86W10 505 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 CCDC36Q8IYA8 594 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 P2RY11Q96G91 374 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 PIWIL1Q96J94 861 aaKnown RBP18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 RADILQ96JH8 1075 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 TEX37Q96LM6 180 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 RANBP3Q9H6Z4 567 aaPredicted RBP18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 MAPRE3Q9UPY8 281 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 TMEM5Q9Y2B1 443 aa18.65■□□□□ 0.58
SEMA4B-215ENST00000560089 APOC1P02654 83 aa18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 SLC2A3P11169 496 aa18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 RGS6P49758 472 aa18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 COL28A1Q2UY09 1125 aa18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 SEZ6Q53EL9 994 aa18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 GPR158Q5T848 1215 aa18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 C17orf99Q6UX52 265 aa18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 CCDC149Q6ZUS6 474 aa18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 KRT73Q86Y46 540 aa18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 MCPH1Q8NEM0 835 aa18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 TSPEARQ8WU66 669 aa18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 YIPF5Q969M3 257 aa18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 ZBTB45Q96K62 511 aaPredicted RBP18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 LDAHQ9H6V9 325 aa18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 NRBP2Q9NSY0 501 aa18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 SPATA6Q9NWH7 488 aaPredicted RBP18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 REV1Q9UBZ9 1251 aa18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 GLS2Q9UI32 602 aa18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 ING4Q9UNL4 249 aa18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 ERVW-1Q9UQF0 538 aa18.64■□□□□ 0.58
SEMA4B-215ENST00000560089 LDOC1O95751 146 aaPredicted RBP18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 VEPH1Q14D04 833 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 GNASQ5JWF2 1037 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 C3orf58Q8NDZ4 430 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 SLC9A6Q92581 669 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 FOXJ1Q92949 421 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 SAMD11Q96NU1 681 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 PIP5K1AQ99755 562 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 C1QTNF6Q9BXI9 259 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 MRPL4Q9BYD3 311 aaKnown RBP18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 CLEC4MQ9H2X3 399 aaPredicted RBP18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 HEXA-AS1Q9H8Q6 139 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 MIOSQ9NXC5 875 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 NMBRP28336 390 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 LIMK1P53667 647 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 TECRLQ5HYJ1 363 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 PHYKPLQ8IUZ5 450 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 MFSD6LQ8IWD5 586 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 TWIST2Q8WVJ9 160 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 DNASE1L2Q92874 299 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 PPM1MQ96MI6 270 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 TSEN34Q9BSV6 310 aaKnown RBP18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 MAGEB5Q9BZ81 275 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 IL1RAPQ9NPH3 570 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 CATSPERZQ9NTU4 200 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 CLCA3PQ9Y6N3 262 aa18.64■□□□□ 0.57
SEMA4B-215ENST00000560089 PIPSLA2A3N6 862 aa18.63■□□□□ 0.57
SEMA4B-215ENST00000560089 TMEM88BA6NKF7 163 aa18.63■□□□□ 0.57
SEMA4B-215ENST00000560089 ZBTB42B2RXF5 422 aa18.63■□□□□ 0.57
SEMA4B-215ENST00000560089 CDK1P06493 297 aa18.63■□□□□ 0.57
SEMA4B-215ENST00000560089 ACSM4P0C7M7 580 aa18.63■□□□□ 0.57
SEMA4B-215ENST00000560089 MAPKAPK2P49137 400 aa18.63■□□□□ 0.57
SEMA4B-215ENST00000560089 CDH17Q12864 832 aa18.63■□□□□ 0.57
SEMA4B-215ENST00000560089 LAPTM4AQ15012 233 aa18.63■□□□□ 0.57
SEMA4B-215ENST00000560089 PROX2Q3B8N5 592 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms