RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 EIF4HQ15056 248 aaKnown RBP7.85□□□□□ -1.15
SMAD3-212ENST00000559937 DHCR24Q15392 516 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 DUOXA1Q1HG43 343 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 RFX4Q33E94 735 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.85□□□□□ -1.15
SMAD3-212ENST00000559937 ZNF658BQ4V348 819 aaPredicted RBP7.85□□□□□ -1.15
SMAD3-212ENST00000559937 CCNYL2Q5T2Q4 361 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 TTC23Q5W5X9 447 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 NOXRED1Q6NXP6 359 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 AGTRAPQ6RW13 159 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 CHRDL2Q6WN34 429 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 DET1Q7L5Y6 550 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 CAMKMTQ7Z624 323 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 NLRP8Q86W28 1048 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 THOC6Q86W42 341 aaKnown RBP7.85□□□□□ -1.15
SMAD3-212ENST00000559937 SLC22A15Q8IZD6 547 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 ZNF786Q8N393 782 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 ZCCHC7Q8N3Z6 543 aaKnown RBP7.85□□□□□ -1.15
SMAD3-212ENST00000559937 KRTCAP2Q8N6L1 136 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 TMIEQ8NEW7 156 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 PJA1Q8NG27 643 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 OR8J2Q8NGG1 315 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 OR10A6Q8NH74 314 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 OR5K1Q8NHB7 308 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 CYGBQ8WWM9 190 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 FIG4Q92562 907 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 SCAMP4Q969E2 229 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 REPS1Q96D71 796 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 CXorf40BQ96DE9 158 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 DTNBP1Q96EV8 351 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 WDR34Q96EX3 536 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 SLC47A1Q96FL8 570 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 DTD2Q96FN9 168 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 ZNF514Q96K75 400 aaPredicted RBP7.85□□□□□ -1.15
SMAD3-212ENST00000559937 CNDP2Q96KP4 475 aaKnown RBP7.85□□□□□ -1.15
SMAD3-212ENST00000559937 COQ10AQ96MF6 247 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 LINC00597Q9H2U6 94 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 DDX18Q9NVP1 670 aaKnown RBP7.85□□□□□ -1.15
SMAD3-212ENST00000559937 SIRT5Q9NXA8 310 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 STOX2Q9P2F5 926 aaPredicted RBP7.85□□□□□ -1.15
SMAD3-212ENST00000559937 LIMD1Q9UGP4 676 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 RSL24D1Q9UHA3 163 aaKnown RBP7.85□□□□□ -1.15
SMAD3-212ENST00000559937 CD84Q9UIB8 345 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 SLC22A14Q9Y267 594 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 PCDHB14Q9Y5E9 798 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 WNT6Q9Y6F9 365 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 CEPT1Q9Y6K0 416 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 COL4A3Q01955 1670 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 CUL9Q8IWT3 2517 aa7.85□□□□□ -1.15
SMAD3-212ENST00000559937 EDDM13A0A1B0GTR0 161 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 C17orf113A0A1B0GUU1 675 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 PRAMEF4O60810 478 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 CCNDBP1O95273 360 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 CST1P01037 141 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 ALPLP05186 524 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 EPCAMP16422 314 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 CEBPBP17676 345 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 CDH2P19022 906 aaPredicted RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 ITGB7P26010 798 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 RPL3P39023 403 aaKnown RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 ETV3P41162 512 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 MTHFRP42898 656 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 MAGEA2P43356 314 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 HLCSP50747 726 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 TMEM115Q12893 351 aaPredicted RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 TOP3AQ13472 1001 aaPredicted RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 DOC2AQ14183 400 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 CBX2Q14781 532 aaPredicted RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 ACOX1Q15067 660 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 PON2Q15165 354 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 RBBP5Q15291 538 aaKnown RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 ZBED5Q49AG3 693 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 PYCR3Q53H96 274 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 SPIN4Q56A73 249 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 XKR6Q5GH73 641 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 ZC3H12BQ5HYM0 836 aaKnown RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 LRRC73Q5JTD7 316 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 RBM48Q5RL73 367 aaKnown RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 TMEM240Q5SV17 173 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 PRAMEF9Q5VWM5 478 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 CPZQ66K79 652 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 NAIF1Q69YI7 327 aaPredicted RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 PARS2Q7L3T8 475 aaKnown RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 GPR155Q7Z3F1 870 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 SERPINA11Q86U17 422 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 HIPK1Q86Z02 1210 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 ZDHHC13Q8IUH4 622 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 SYT12Q8IV01 421 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 CPA6Q8N4T0 437 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 RASGEF1AQ8N9B8 481 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 ZNF420Q8TAQ5 688 aaPredicted RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 MAGEE2Q8TD90 523 aaPredicted RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 CYB5D2Q8WUJ1 264 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 HERVK_113Q902F9 699 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 PYCR2Q96C36 320 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 AP2M1Q96CW1 435 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 MTFMTQ96DP5 389 aaKnown RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 C11orf24Q96F05 449 aaPredicted RBP7.84□□□□□ -1.15
SMAD3-212ENST00000559937 APIPQ96GX9 242 aa7.84□□□□□ -1.15
SMAD3-212ENST00000559937 LINC00615Q96LM1 132 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms