RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 GALR2O43603 387 aaPredicted RBP17.26■□□□□ 0.35
SNX1-208ENST00000559844 UGDHO60701 494 aa17.26■□□□□ 0.35
SNX1-208ENST00000559844 NDUFS2O75306 463 aa17.26■□□□□ 0.35
SNX1-208ENST00000559844 PEX2P28328 305 aa17.26■□□□□ 0.35
SNX1-208ENST00000559844 PPP2CBP62714 309 aa17.26■□□□□ 0.35
SNX1-208ENST00000559844 PPP2CAP67775 309 aa17.26■□□□□ 0.35
SNX1-208ENST00000559844 ZNF33BQ06732 778 aa17.26■□□□□ 0.35
SNX1-208ENST00000559844 ABRQ12979 859 aa17.26■□□□□ 0.35
SNX1-208ENST00000559844 CAPRIN1Q14444 709 aaKnown RBP17.26■□□□□ 0.35
SNX1-208ENST00000559844 CPSF6Q16630 551 aaKnown RBP eCLIP17.26■□□□□ 0.35
SNX1-208ENST00000559844 SGO1Q5FBB7 561 aa17.26■□□□□ 0.35
SNX1-208ENST00000559844 RAET1GQ6H3X3 334 aa17.26■□□□□ 0.35
SNX1-208ENST00000559844 KLHDC8AQ8IYD2 350 aa17.26■□□□□ 0.35
SNX1-208ENST00000559844 FAM9CQ8IZT9 166 aa17.26■□□□□ 0.35
SNX1-208ENST00000559844 SELENOMQ8WWX9 145 aa17.26■□□□□ 0.35
SNX1-208ENST00000559844 ZNF514Q96K75 400 aaPredicted RBP17.26■□□□□ 0.35
SNX1-208ENST00000559844 C6orf106Q9H6K1 298 aaPredicted RBP17.26■□□□□ 0.35
SNX1-208ENST00000559844 FARSBQ9NSD9 589 aaKnown RBP17.26■□□□□ 0.35
SNX1-208ENST00000559844 CMTM6Q9NX76 183 aa17.26■□□□□ 0.35
SNX1-208ENST00000559844 SLC22A14Q9Y267 594 aa17.26■□□□□ 0.35
SNX1-208ENST00000559844 ANKRD12Q6UB98 2062 aa17.26■□□□□ 0.35
SNX1-208ENST00000559844 SDK1Q7Z5N4 2213 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 A0A1W2PQU0 124 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 TMEM202A6NGA9 273 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 ARHGEF33A8MVX0 844 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 MAP3K13O43283 966 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 SEC22BO75396 215 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 RSL1D1O76021 490 aaKnown RBP17.25■□□□□ 0.35
SNX1-208ENST00000559844 SOD1P00441 154 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 SP9P0CG40 484 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 VARSP26640 1264 aaKnown RBP17.25■□□□□ 0.35
SNX1-208ENST00000559844 EEFSECP57772 596 aaKnown RBP17.25■□□□□ 0.35
SNX1-208ENST00000559844 RPS21P63220 83 aaKnown RBP17.25■□□□□ 0.35
SNX1-208ENST00000559844 HMGCS1Q01581 520 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 ZXDCQ2QGD7 858 aaPredicted RBP17.25■□□□□ 0.35
SNX1-208ENST00000559844 ZNF528Q3MIS6 628 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 PAGE3Q5JUK9 113 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 KIAA1161Q6NSJ0 714 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 NEK5Q6P3R8 708 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 HORMAD1Q86X24 394 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 GOLM1Q8NBJ4 401 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 TMEM125Q96AQ2 219 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 EFHD1Q9BUP0 239 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 ACTL8Q9H568 366 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 TRIM39Q9HCM9 518 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 FAM8A1Q9UBU6 413 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 ZNHIT2Q9UHR6 403 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 RIMS3Q9UJD0 308 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 ZFR2Q9UPR6 939 aaKnown RBP17.25■□□□□ 0.35
SNX1-208ENST00000559844 AP4S1Q9Y587 144 aa17.25■□□□□ 0.35
SNX1-208ENST00000559844 IGLON5A6NGN9 336 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 NPIPB8E9PQR5 432 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 DLL1O00548 723 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 BCKDHBP21953 392 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 PRPH2P23942 346 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 SLC7A1P30825 629 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 MAT2AP31153 395 aaKnown RBP17.24■□□□□ 0.35
SNX1-208ENST00000559844 NUBP1P53384 320 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 PFN3P60673 137 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 PLOD1Q02809 727 aaPredicted RBP17.24■□□□□ 0.35
SNX1-208ENST00000559844 RPL6Q02878 288 aaKnown RBP17.24■□□□□ 0.35
SNX1-208ENST00000559844 KLC1Q07866 573 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 SRSF5Q13243 272 aaKnown RBP17.24■□□□□ 0.35
SNX1-208ENST00000559844 LIPJQ5W064 366 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 ADCY4Q8NFM4 1077 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 KLK6Q92876 244 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 SLC45A3Q96JT2 553 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 DPY30Q9C005 99 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 COPS7BQ9H9Q2 264 aaPredicted RBP17.24■□□□□ 0.35
SNX1-208ENST00000559844 DTNAQ9Y4J8 743 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 FANCMQ8IYD8 2048 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 AQP12BA6NM10 295 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 H3BM21 787 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 PDYNP01213 254 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 JUPP14923 745 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 MAPK1P28482 360 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 HALP42357 657 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 LRRC36Q1X8D7 754 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 GRAMD1BQ3KR37 738 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.24■□□□□ 0.35
SNX1-208ENST00000559844 SLC36A4Q6YBV0 504 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 TRIM69Q86WT6 500 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 AQP12AQ8IXF9 295 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 DEFB119Q8N690 84 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 FBXO15Q8NCQ5 510 aaPredicted RBP17.24■□□□□ 0.35
SNX1-208ENST00000559844 NELL1Q92832 810 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 PYCR2Q96C36 320 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 CMTM7Q96FZ5 175 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 LINC00615Q96LM1 132 aaPredicted RBP17.24■□□□□ 0.35
SNX1-208ENST00000559844 ATG10Q9H0Y0 220 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 ZSCAN32Q9NX65 697 aa17.24■□□□□ 0.35
SNX1-208ENST00000559844 C17orf113A0A1B0GUU1 675 aa17.23■□□□□ 0.35
SNX1-208ENST00000559844 VEGFDO43915 354 aa17.23■□□□□ 0.35
SNX1-208ENST00000559844 PRPS2P11908 318 aa17.23■□□□□ 0.35
SNX1-208ENST00000559844 ITPKAP23677 461 aa17.23■□□□□ 0.35
SNX1-208ENST00000559844 PBLDP30039 288 aaPredicted RBP17.23■□□□□ 0.35
SNX1-208ENST00000559844 CASP2P42575 452 aa17.23■□□□□ 0.35
SNX1-208ENST00000559844 PREPP48147 710 aa17.23■□□□□ 0.35
SNX1-208ENST00000559844 CHIT1Q13231 466 aa17.23■□□□□ 0.35
SNX1-208ENST00000559844 ZNF658BQ4V348 819 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms