RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 PPM1DO15297 605 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 SNX3O60493 162 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 CRCPO75575 148 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 C1GALT1C1LP0DN25 315 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 JUPP14923 745 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 CCR10P46092 362 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 MAZP56270 477 aaKnown RBP14.36□□□□□ -0.11
VPS18-202ENST00000558474 GABPB1Q06547 395 aaPredicted RBP14.36□□□□□ -0.11
VPS18-202ENST00000558474 SLC14A1Q13336 389 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 PAGE2BQ5JRK9 111 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 GKAP1Q5VSY0 366 aaPredicted RBP14.36□□□□□ -0.11
VPS18-202ENST00000558474 ICE2Q659A1 982 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 GRHL2Q6ISB3 625 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 SUSD1Q6UWL2 747 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 SLCO4C1Q6ZQN7 724 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 MINDY1Q8N5J2 469 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 KYQ8NBH2 561 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 ABHD11Q8NFV4 315 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 BCAS4Q8TDM0 211 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 NEIL2Q969S2 332 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 UBE2E3Q969T4 207 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 REPS1Q96D71 796 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 SLC38A3Q99624 504 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 XKR8Q9H6D3 395 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 NT5DC2Q9H857 520 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 IL21RQ9HBE5 538 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 ACSS2Q9NR19 701 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 PNPOQ9NVS9 261 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 KCNK4Q9NYG8 393 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 APOBEC2Q9Y235 224 aaKnown RBP14.36□□□□□ -0.11
VPS18-202ENST00000558474 TSC22D4Q9Y3Q8 395 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 KLK4Q9Y5K2 254 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 USH1CQ9Y6N9 552 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 A0A0C4DFX4 3053 aa14.36□□□□□ -0.11
VPS18-202ENST00000558474 OR5K3A6NET4 321 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 E7EQ34 232 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 H0YIV9 168 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 BTN3A3O00478 584 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 PPP6CO00743 305 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 OR4F21O95013 312 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 SLC34A2O95436 690 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 KRT6AP02538 564 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 KRT6BP04259 564 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 TSPAN8P19075 237 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 CMPK1P30085 196 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 HMOX2P30519 316 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 KRT6CP48668 564 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 INHBCP55103 352 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 GPLD1P80108 840 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 CHIT1Q13231 466 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 NR0B2Q15466 257 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 HIST2H2ACQ16777 129 aaPredicted RBP14.35□□□□□ -0.11
VPS18-202ENST00000558474 SLC5A12Q1EHB4 618 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 UGT3A2Q3SY77 523 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 XKR6Q5GH73 641 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 HIST2H2AA3Q6FI13 130 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 CGB2Q6NT52 195 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 LETMD1Q6P1Q0 360 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 NXPE4Q6UWF7 544 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 SPATA21Q7Z572 469 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 SLC35F3Q8IY50 421 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 KRT78Q8N1N4 520 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 OR4K1Q8NGD4 311 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 METTL6Q8TCB7 284 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 ATOH1Q92858 354 aaPredicted RBP14.35□□□□□ -0.11
VPS18-202ENST00000558474 SEC16BQ96JE7 1060 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 PLCD4Q9BRC7 762 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 GTPBP2Q9BX10 602 aaKnown RBP14.35□□□□□ -0.11
VPS18-202ENST00000558474 FSCN3Q9NQT6 498 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 TMEM184CQ9NVA4 438 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 LRIT1Q9P2V4 623 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 EPHA6Q9UF33 1036 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 TAC3Q9UHF0 121 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 ADGRE2Q9UHX3 823 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 PADI4Q9UM07 663 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 SNX6Q9UNH7 406 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 PCDHGA11Q9Y5H2 935 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 COL5A1P20908 1838 aaPredicted RBP14.35□□□□□ -0.11
VPS18-202ENST00000558474 RALGAPA1Q6GYQ0 2036 aa14.35□□□□□ -0.11
VPS18-202ENST00000558474 OR6C74A6NCV1 312 aa14.34□□□□□ -0.11
VPS18-202ENST00000558474 ISM1B1AKI9 464 aa14.34□□□□□ -0.11
VPS18-202ENST00000558474 NDUFAB1O14561 156 aa14.34□□□□□ -0.11
VPS18-202ENST00000558474 ZNF195O14628 629 aa14.34□□□□□ -0.11
VPS18-202ENST00000558474 VPS4BO75351 444 aa14.34□□□□□ -0.11
VPS18-202ENST00000558474 UBXN7O94888 489 aa14.34□□□□□ -0.11
VPS18-202ENST00000558474 LMNAP02545 664 aaKnown RBP14.34□□□□□ -0.11
VPS18-202ENST00000558474 CAPN1P07384 714 aa14.34□□□□□ -0.11
VPS18-202ENST00000558474 KITP10721 976 aa14.34□□□□□ -0.11
VPS18-202ENST00000558474 GSTM2P28161 218 aa14.34□□□□□ -0.11
VPS18-202ENST00000558474 PRDX3P30048 256 aaKnown RBP14.34□□□□□ -0.11
VPS18-202ENST00000558474 PEBP1P30086 187 aaKnown RBP14.34□□□□□ -0.11
VPS18-202ENST00000558474 SERPINB1P30740 379 aa14.34□□□□□ -0.11
VPS18-202ENST00000558474 ARL1P40616 181 aaPredicted RBP14.34□□□□□ -0.11
VPS18-202ENST00000558474 GRK6P43250 576 aa14.34□□□□□ -0.11
VPS18-202ENST00000558474 DUSP3P51452 185 aaPredicted RBP14.34□□□□□ -0.11
VPS18-202ENST00000558474 CCR8P51685 355 aa14.34□□□□□ -0.11
VPS18-202ENST00000558474 RELAQ04206 551 aa14.34□□□□□ -0.11
VPS18-202ENST00000558474 TSTA3Q13630 321 aaPredicted RBP14.34□□□□□ -0.11
VPS18-202ENST00000558474 DOC2AQ14183 400 aa14.34□□□□□ -0.11
VPS18-202ENST00000558474 SF1Q15637 639 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms