RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 CRB3Q9BUF7 120 aa5.63□□□□□ -1.51
VPS33B-207ENST00000557470 SPRTNQ9H040 489 aaPredicted RBP5.63□□□□□ -1.51
VPS33B-207ENST00000557470 TRABDQ9H4I3 376 aa5.63□□□□□ -1.51
VPS33B-207ENST00000557470 XKR8Q9H6D3 395 aa5.63□□□□□ -1.51
VPS33B-207ENST00000557470 FAM60AQ9NP50 221 aa5.63□□□□□ -1.51
VPS33B-207ENST00000557470 SLC6A20Q9NP91 592 aa5.63□□□□□ -1.51
VPS33B-207ENST00000557470 SLC22A11Q9NSA0 550 aa5.63□□□□□ -1.51
VPS33B-207ENST00000557470 OLAHQ9NV23 265 aa5.63□□□□□ -1.51
VPS33B-207ENST00000557470 SMOXQ9NWM0 555 aa5.63□□□□□ -1.51
VPS33B-207ENST00000557470 ITGB1BP2Q9UKP3 347 aa5.63□□□□□ -1.51
VPS33B-207ENST00000557470 LRCH1Q9Y2L9 728 aa5.63□□□□□ -1.51
VPS33B-207ENST00000557470 PKP3Q9Y446 797 aa5.63□□□□□ -1.51
VPS33B-207ENST00000557470 KLF2Q9Y5W3 355 aaPredicted RBP5.63□□□□□ -1.51
VPS33B-207ENST00000557470 HEBP2Q9Y5Z4 205 aa5.63□□□□□ -1.51
VPS33B-207ENST00000557470 PCM1Q15154 2024 aa5.63□□□□□ -1.51
VPS33B-207ENST00000557470 CCDC88CQ9P219 2028 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 MED13LQ71F56 2210 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 A0A087X0T9 212 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 A0A0A6YYK5 440 aaPredicted RBP5.62□□□□□ -1.51
VPS33B-207ENST00000557470 A0A1B0GVC2 190 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 LOC285095A0A1B0GVY8 99 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 LRRD1A4D1F6 860 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 KLHL33A6NCF5 533 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 C3orf70A6NLC5 250 aaPredicted RBP5.62□□□□□ -1.51
VPS33B-207ENST00000557470 C2orf74A8MZ97 194 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 SOCS6O14544 535 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 APOL1O14791 398 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 ZSCAN9O15535 394 aaPredicted RBP5.62□□□□□ -1.51
VPS33B-207ENST00000557470 JRKO75564 520 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 PROSCO94903 275 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 CD63P08962 238 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 FAM228BP0C875 321 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 COX6B1P14854 86 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 UGT2B7P16662 529 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 ITGAXP20702 1163 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 MMP11P24347 488 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 KDELR1P24390 212 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 HTR1EP28566 365 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 CD68P34810 354 aaPredicted RBP5.62□□□□□ -1.51
VPS33B-207ENST00000557470 TDGF1P3P51864 188 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 BTKQ06187 659 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 PRKG2Q13237 762 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 TESK1Q15569 626 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 SLC1A5Q15758 541 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 STX1AQ16623 288 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 ZNF630Q2M218 657 aaPredicted RBP5.62□□□□□ -1.51
VPS33B-207ENST00000557470 KRTAP21-3Q3LHN1 58 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 TUBB8Q3ZCM7 444 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 TEX44Q53QW1 395 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 SLC9A4Q6AI14 798 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 ZNF324BQ6AW86 544 aaPredicted RBP5.62□□□□□ -1.51
VPS33B-207ENST00000557470 PGM2L1Q6PCE3 622 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 SPESP1Q6UW49 350 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 NLRC3Q7RTR2 1065 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 AMIGO1Q86WK6 493 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 KIF18BQ86Y91 864 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 CFAP206Q8IYR0 622 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 SLC25A41Q8N5S1 370 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 BCORP1Q8N888 145 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 SLC35G2Q8TBE7 412 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 HM13Q8TCT9 377 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 ZNF398Q8TD17 642 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 BLOC1S5Q8TDH9 187 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 GAL3ST3Q96A11 431 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 CCDC120Q96HB5 630 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 RBM41Q96IZ5 413 aaKnown RBP5.62□□□□□ -1.51
VPS33B-207ENST00000557470 LINC00615Q96LM1 132 aaPredicted RBP5.62□□□□□ -1.51
VPS33B-207ENST00000557470 MAGEB10Q96LZ2 347 aaPredicted RBP5.62□□□□□ -1.51
VPS33B-207ENST00000557470 TEKT5Q96M29 485 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 CCM2Q9BSQ5 444 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 HGH1Q9BTY7 390 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 SSBP4Q9BWG4 385 aaPredicted RBP5.62□□□□□ -1.51
VPS33B-207ENST00000557470 AP1M1Q9BXS5 423 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 OR52A5Q9H2C5 316 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 TFB2MQ9H5Q4 396 aaKnown RBP5.62□□□□□ -1.51
VPS33B-207ENST00000557470 ANO10Q9NW15 660 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.62□□□□□ -1.51
VPS33B-207ENST00000557470 HACD3Q9P035 362 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 FAM153AQ9UHL3 310 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 CDC23Q9UJX2 597 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 ARL5AQ9Y689 179 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 AP1M2Q9Y6Q5 423 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 MYO7BQ6PIF6 2116 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 DOCK10Q96BY6 2186 aa5.62□□□□□ -1.51
VPS33B-207ENST00000557470 ANKRD34BA5PLL1 514 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 ZNF487B1APH4 448 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 PCDH17O14917 1159 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 STX7O15400 261 aaKnown RBP5.61□□□□□ -1.51
VPS33B-207ENST00000557470 FKBP9O95302 570 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 EPOP01588 193 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 PDHA2P29803 388 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 PRLHRP49683 370 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 DYNLT1P63172 113 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 Q0VFX4 171 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 WASHC5Q12768 1159 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 ODF1Q14990 250 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 PRKD1Q15139 912 aaPredicted RBP5.61□□□□□ -1.51
VPS33B-207ENST00000557470 SKOR2Q2VWA4 1001 aaPredicted RBP5.61□□□□□ -1.51
VPS33B-207ENST00000557470 BBS9Q3SYG4 887 aa5.61□□□□□ -1.51
VPS33B-207ENST00000557470 ZNF658BQ4V348 819 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms