RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ERVK-9P63128 1117 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 MC1RQ01726 317 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 TMEM69Q5SWH9 247 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 DET1Q7L5Y6 550 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 QPCTLQ9NXS2 382 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 MAOAP21397 527 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 SEMA3AQ14563 771 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 MELKQ14680 651 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 PAPD4Q6PIY7 484 aaKnown RBP8.64□□□□□ -1.03
SYNE3-205ENST00000557275 GTF2H5Q6ZYL4 71 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 SH3RF1Q7Z6J0 888 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 TRABD2AQ86V40 505 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 RAVER1Q8IY67 606 aaKnown RBP8.64□□□□□ -1.03
SYNE3-205ENST00000557275 BEST3Q8N1M1 668 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 YIPF7Q8N8F6 280 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 NSUN4Q96CB9 384 aaKnown RBP8.64□□□□□ -1.03
SYNE3-205ENST00000557275 DNAJC5Q9H3Z4 198 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 SNTG2Q9NY99 539 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 CASC3O15234 703 aaKnown RBP8.64□□□□□ -1.03
SYNE3-205ENST00000557275 RAB30Q15771 203 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 SH3PXD2AQ5TCZ1 1133 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 GLT8D1Q68CQ7 371 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 HFE2Q6ZVN8 426 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 TXNRD3Q86VQ6 643 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 SOCS4Q8WXH5 440 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 SLC7A11Q9UPY5 501 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 GPSM3Q9Y4H4 160 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 COL6A1P12109 1028 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 TMEM62Q0P6H9 643 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 ANKDD1AQ495B1 522 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 CPT1CQ8TCG5 803 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 STYXQ8WUJ0 223 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 TBL1XR1Q9BZK7 514 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.64□□□□□ -1.03
SYNE3-205ENST00000557275 IPPKQ9H8X2 491 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 FBXO5Q9UKT4 447 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 NFASCO94856 1347 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 FOXN1O15353 648 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 PRPH2P23942 346 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 SERPINF1P36955 418 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 MXD1Q05195 221 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 LASP1Q14847 261 aaKnown RBP8.64□□□□□ -1.03
SYNE3-205ENST00000557275 UGT3A2Q3SY77 523 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 PET117Q6UWS5 81 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 VSTM1Q6UX27 236 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 SCUBE3Q8IX30 993 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 CMTM1Q8IZ96 169 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 PPM1MQ96MI6 270 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 CORO1BQ9BR76 489 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 STRA6Q9BX79 667 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 EQTNQ9NQ60 294 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 ITM2CQ9NQX7 267 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 CDC14AQ9UNH5 594 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 FLRT2O43155 660 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 HTR1AP08908 422 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 PROZP22891 400 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 GRIK2Q13002 908 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 CRAMP1Q96RY5 1269 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 RNF121Q9H920 327 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 POLE4Q9NR33 117 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 HEBP1Q9NRV9 189 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 TIMM8BQ9Y5J9 83 aaPredicted RBP8.64□□□□□ -1.03
SYNE3-205ENST00000557275 IQGAP3Q86VI3 1631 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 NPIPA5E9PKD4 350 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 APOC3P02656 99 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 ANXA4P09525 319 aaPredicted RBP8.64□□□□□ -1.03
SYNE3-205ENST00000557275 CADM2Q8N3J6 435 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 TWIST2Q8WVJ9 160 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 TGM7Q96PF1 710 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 HIPK2Q9H2X6 1198 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 NPIPA1Q9UND3 350 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 ZNF821O75541 412 aaPredicted RBP8.64□□□□□ -1.03
SYNE3-205ENST00000557275 PTTG1O95997 202 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 CYP3A5P20815 502 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 ASPAP45381 313 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 SLC26A9Q7LBE3 791 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 GPR149Q86SP6 731 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 GLYATL1Q969I3 302 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 ADAM2Q99965 735 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 MYOZ2Q9NPC6 264 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 LAMP5Q9UJQ1 280 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 PCDHB11Q9Y5F2 797 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 RGS9O75916 674 aaPredicted RBP8.64□□□□□ -1.03
SYNE3-205ENST00000557275 ALPPL2P10696 532 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 CXCR1P25024 350 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 CCND3P30281 292 aaPredicted RBP8.64□□□□□ -1.03
SYNE3-205ENST00000557275 SCNN1GP51170 649 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 EEF1A1P68104 462 aaKnown RBP8.64□□□□□ -1.03
SYNE3-205ENST00000557275 EEF1A2Q05639 463 aaKnown RBP8.64□□□□□ -1.03
SYNE3-205ENST00000557275 CTBP1Q13363 440 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 EEF1A1P5Q5VTE0 462 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 DUPD1Q68J44 220 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 CYP2S1Q96SQ9 504 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 KCNIP2Q9NS61 270 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 DPPA5A6NC42 116 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 E9PAM4 449 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 TULP2O00295 520 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 FARS2O95363 451 aaKnown RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 PRPS1L1P21108 318 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 LDLRAP1Q5SW96 308 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms