RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 PPP1R2P1Q96PQ5 205 aa8.6□□□□□ -1.03
HNRNPC-227ENST00000556897 ALS2CR12Q96Q35 445 aa8.6□□□□□ -1.03
HNRNPC-227ENST00000556897 ABHD10Q9NUJ1 306 aa8.6□□□□□ -1.03
HNRNPC-227ENST00000556897 ZC3H7BQ9UGR2 993 aaKnown RBP8.6□□□□□ -1.03
HNRNPC-227ENST00000556897 INTUQ9ULD6 942 aa8.6□□□□□ -1.03
HNRNPC-227ENST00000556897 SLC39A10Q9ULF5 831 aa8.6□□□□□ -1.03
HNRNPC-227ENST00000556897 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.6□□□□□ -1.03
HNRNPC-227ENST00000556897 NCOA6Q14686 2063 aaPredicted RBP8.6□□□□□ -1.03
HNRNPC-227ENST00000556897 IGHV1-45A0A0A0MS14 117 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 A0A1W2PQ72 361 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 SYCE3A1L190 88 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 KRT87PA6NCN2 255 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 OR5H15A6NDH6 313 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 MROH6A6NGR9 719 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 IQCF5A8MTL0 148 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 IDSB3KWA1 339 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 TARM1B6A8C7 271 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 RASGRF2O14827 1237 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 PRAMEF2O60811 474 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 WFS1O76024 890 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 RPN2P04844 631 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 ITGAMP11215 1152 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 FBLP22087 321 aaKnown RBP8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 PSMB5P28074 263 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 KIR3DL1P43629 444 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 SMSP52788 366 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 EMP2P54851 167 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 ZNF33BQ06732 778 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 KRTAP21-3Q3LHN1 58 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 CCDC38Q502W7 563 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 ABHD17BQ5VST6 288 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 UNC5DQ6UXZ4 953 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 SPNS3Q6ZMD2 512 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 RIPOR1Q6ZS17 1223 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 CDH24Q86UP0 819 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 CEP97Q8IW35 865 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 KLHDC8BQ8IXV7 354 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 SUN3Q8TAQ9 357 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 LKAAEAR1Q8TD35 194 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 ADAMTS18Q8TE60 1221 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 ASZ1Q8WWH4 475 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 MTFMTQ96DP5 389 aaKnown RBP8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 C10orf90Q96M02 699 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 MIPEPQ99797 713 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 YIPF2Q9BWQ6 316 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 RNF32Q9H0A6 362 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 RIC8BQ9NVN3 520 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 TRPC4Q9UBN4 977 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 TFR2Q9UP52 801 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 FAM169AQ9Y6X4 670 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 CPAMD8Q8IZJ3 1885 aa8.59□□□□□ -1.03
HNRNPC-227ENST00000556897 F8W8V4 182 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 PJA2O43164 708 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 DIAPH2O60879 1101 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 MFAP3LO75121 409 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 GPC4O75487 556 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 FKBP9O95302 570 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 CLDN14O95500 239 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 METTL18O95568 372 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 GOT2P00505 430 aaKnown RBP8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 APOA4P06727 396 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 TPM3P06753 285 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 HEXBP07686 556 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 CAPN3P20807 821 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 AGAP20933 346 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 PSMA3P25788 255 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 HADHBP55084 474 aaKnown RBP8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 COPS2P61201 443 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 YBX1P67809 324 aaKnown RBP8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 TRIM14Q14142 442 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 PARP6Q2NL67 630 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 MUM1Q2TAK8 710 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 CCSMST1Q4G0I0 132 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 NEK10Q6ZWH5 1172 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 RNF44Q7L0R7 432 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 KRT222Q8N1A0 295 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 TAB3Q8N5C8 712 aaPredicted RBP8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 OR2L3Q8NG85 312 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 OR13J1Q8NGT2 312 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 MAGED4Q96JG8 741 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 CABS1Q96KC9 395 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 RAB11FIP5Q9BXF6 653 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 OSBPL8Q9BZF1 889 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 TSPAN10Q9H1Z9 355 aaPredicted RBP8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 LRRC40Q9H9A6 602 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 STMN3Q9NZ72 180 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 RUVBL2Q9Y230 463 aaKnown RBP8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 KLK4Q9Y5K2 254 aa8.58□□□□□ -1.04
HNRNPC-227ENST00000556897 LOC102723996A0A087X1L8 192 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 A8MUI8 341 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 FAM227AF5H4B4 570 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 H0YGG7 62 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 SLCO2B1O94956 709 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 MYBL2P10244 700 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 ERVK-10P10266 1014 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 BDKRB1P46663 353 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 EFNA3P52797 238 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 ARF3P61204 181 aaPredicted RBP8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 TLE4Q04727 773 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 SEMA3AQ14563 771 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms