RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 CFAP61Q8NHU2 1237 aa11.33□□□□□ -0.6
ACTN1-221ENST00000556571 TSSK1BQ9BXA7 367 aa11.33□□□□□ -0.6
ACTN1-221ENST00000556571 RAB11FIP5Q9BXF6 653 aa11.33□□□□□ -0.6
ACTN1-221ENST00000556571 OSBPL8Q9BZF1 889 aa11.33□□□□□ -0.6
ACTN1-221ENST00000556571 RNF32Q9H0A6 362 aa11.33□□□□□ -0.6
ACTN1-221ENST00000556571 RIC8BQ9NVN3 520 aa11.33□□□□□ -0.6
ACTN1-221ENST00000556571 ZC3H7BQ9UGR2 993 aaKnown RBP11.33□□□□□ -0.6
ACTN1-221ENST00000556571 CIDEBQ9UHD4 219 aa11.33□□□□□ -0.6
ACTN1-221ENST00000556571 CDC14AQ9UNH5 594 aa11.33□□□□□ -0.6
ACTN1-221ENST00000556571 KLK4Q9Y5K2 254 aa11.33□□□□□ -0.6
ACTN1-221ENST00000556571 MED13LQ71F56 2210 aa11.33□□□□□ -0.6
ACTN1-221ENST00000556571 NF1P21359 2839 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 IGHV1-45A0A0A0MS14 117 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 CCDC162PA2VCL2 907 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 OR51F1A6NGY5 319 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 PSMD3O43242 534 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 PRICKLE3O43900 615 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-221ENST00000556571 OR1I1O60431 355 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 WDPCPO95876 746 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 APOA4P06727 396 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 ICAM2P13598 275 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 CAPN3P20807 821 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 FBLP22087 321 aaKnown RBP11.32□□□□□ -0.6
ACTN1-221ENST00000556571 PTPN7P35236 360 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 MAGEA1P43355 309 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 FRMPD2BQ6IN97 320 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 LAPTM4BQ86VI4 370 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 VRK3Q8IV63 474 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 RAB42Q8N4Z0 105 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 RAD51AP1Q96B01 352 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 FAM118BQ9BPY3 351 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 CARD6Q9BX69 1037 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 SH3BGRL2Q9UJC5 107 aa11.32□□□□□ -0.6
ACTN1-221ENST00000556571 LOC105369274A0A096LPK9 316 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 LOC102723532A0A0G2JNH3 316 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 A0A0J9YVX5 310 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 OR5H15A6NDH6 313 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 IDSB3KWA1 339 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 PRPF4O43172 522 aaKnown RBP eCLIP11.31□□□□□ -0.61e-8■■■□□ 14.8
ACTN1-221ENST00000556571 SLC19A2O60779 497 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 PRAMEF2O60811 474 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 SLCO2B1O94956 709 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 TJP3O95049 919 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 MED26O95402 600 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 F10P00742 488 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 EIF2S1P05198 315 aaKnown RBP11.31□□□□□ -0.6
ACTN1-221ENST00000556571 ERVK-10P10266 1014 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 ESRRAP11474 423 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-221ENST00000556571 CDC25BP30305 580 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 CTNNA1P35221 906 aaKnown RBP11.31□□□□□ -0.6
ACTN1-221ENST00000556571 PPARGP37231 505 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-221ENST00000556571 CETN2P41208 172 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 EMP3P54852 163 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 EEF1A2Q05639 463 aaKnown RBP11.31□□□□□ -0.6
ACTN1-221ENST00000556571 DSG2Q14126 1118 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 TESK1Q15569 626 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 ABHD17BQ5VST6 288 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 HIBCHQ6NVY1 386 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-221ENST00000556571 AFTPHQ6ULP2 937 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 SPNS3Q6ZMD2 512 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 LINC00523Q86TU6 105 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 OR4N4Q8N0Y3 316 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 SPC24Q8NBT2 197 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 HDAC10Q969S8 669 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 MIPEPQ99797 713 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 C14orf105Q9NVL8 296 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 PIH1D1Q9NWS0 290 aaKnown RBP11.31□□□□□ -0.6
ACTN1-221ENST00000556571 STMN3Q9NZ72 180 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 TRPC4Q9UBN4 977 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 TEKT2Q9UIF3 430 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 PCDHA3Q9Y5H8 950 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 MRFAP1Q9Y605 127 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 SPG11Q96JI7 2443 aa11.31□□□□□ -0.6
ACTN1-221ENST00000556571 NAV3Q8IVL0 2385 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 LOC102723996A0A087X1L8 192 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 METTL18O95568 372 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 GOT2P00505 430 aaKnown RBP11.3□□□□□ -0.6
ACTN1-221ENST00000556571 HEXBP07686 556 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 AOAHP28039 575 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 ADORA2A-AS1P86434 159 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 NAA25Q14CX7 972 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 TMED2Q15363 201 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 LONRF1Q17RB8 773 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 PRTGQ2VWP7 1150 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 P3H1Q32P28 736 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 KRTAP21-3Q3LHN1 58 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 CCDC38Q502W7 563 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 RNF44Q7L0R7 432 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 TXLNBQ8N3L3 684 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 OR2L3Q8NG85 312 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 OR13J1Q8NGT2 312 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 OR4L1Q8NH43 312 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 GSDMBQ8TAX9 411 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 HMGCLL1Q8TB92 370 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 MTFMTQ96DP5 389 aaKnown RBP11.3□□□□□ -0.6
ACTN1-221ENST00000556571 MVB12AQ96EY5 273 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 CABS1Q96KC9 395 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 C10orf90Q96M02 699 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 BAG1Q99933 345 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-221ENST00000556571 ZFYVE21Q9BQ24 234 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms