RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 MARCH4Q9P2E8 410 aaPredicted RBP16.85■□□□□ 0.29
SDR39U1-219ENST00000556523 C3orf18Q9UK00 162 aa16.85■□□□□ 0.29
SDR39U1-219ENST00000556523 PPP2R2CQ9Y2T4 447 aa16.85■□□□□ 0.29
SDR39U1-219ENST00000556523 NFS1Q9Y697 457 aa16.85■□□□□ 0.29
SDR39U1-219ENST00000556523 ZGRF1Q86YA3 2104 aa16.85■□□□□ 0.29
SDR39U1-219ENST00000556523 VSTM2BA6NLU5 285 aa16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 CD3EAPO15446 510 aaKnown RBP16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 USP1O94782 785 aa16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 C1orf105O95561 183 aa16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 SESN2P58004 480 aaPredicted RBP16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 ARG2P78540 354 aa16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 KLC1Q07866 573 aa16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 MUM1Q2TAK8 710 aa16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 PCID2Q5JVF3 399 aa16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 FRMPD2BQ6IN97 320 aa16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 CNSTQ6PJW8 725 aa16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 RNF44Q7L0R7 432 aa16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 BCORP1Q8N888 145 aa16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 OR2L3Q8NG85 312 aa16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 MAGEB10Q96LZ2 347 aaPredicted RBP16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 OLAHQ9NV23 265 aa16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 ZC3H7BQ9UGR2 993 aaKnown RBP16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 RUVBL2Q9Y230 463 aaKnown RBP16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 CROCCQ5TZA2 2017 aa16.84■□□□□ 0.29
SDR39U1-219ENST00000556523 NSG1A0A0A6YYJ2 146 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 DYTNA2CJ06 578 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 PRPF4O43172 522 aaKnown RBP eCLIP16.83■□□□□ 0.287e-20■■■□□ 19.1
SDR39U1-219ENST00000556523 ZSCAN12O43309 604 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 PRICKLE3O43900 615 aaPredicted RBP16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 VPS26AO75436 327 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 ZGLP1P0C6A0 271 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 CMPK1P30085 196 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 EIF3BP55884 814 aaKnown RBP16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 SNX1Q13596 522 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 NAA30Q147X3 362 aaPredicted RBP16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 TICAM1Q8IUC6 712 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 KBTBD2Q8IY47 623 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 DTWD1Q8N5C7 304 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 HMGCLL1Q8TB92 370 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 C1orf54Q8WWF1 131 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 CABS1Q96KC9 395 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 LMF1Q96S06 567 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 ZFYVE21Q9BQ24 234 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 CHRAC1Q9NRG0 131 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 TSR3Q9UJK0 312 aaKnown RBP16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 GUCA1BQ9UMX6 200 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 KLK4Q9Y5K2 254 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 CAPN6Q9Y6Q1 641 aa16.83■□□□□ 0.28
SDR39U1-219ENST00000556523 A0A1B0GUH1 482 aa16.82■□□□□ 0.28
SDR39U1-219ENST00000556523 PFDN6O15212 129 aa16.82■□□□□ 0.28
SDR39U1-219ENST00000556523 FDXRP22570 491 aa16.82■□□□□ 0.28
SDR39U1-219ENST00000556523 RPS3P23396 243 aaKnown RBP eCLIP16.82■□□□□ 0.28
SDR39U1-219ENST00000556523 CXCR2P25025 360 aa16.82■□□□□ 0.28
SDR39U1-219ENST00000556523 Q0VFX4 171 aa16.82■□□□□ 0.28
SDR39U1-219ENST00000556523 CCSMST1Q4G0I0 132 aa16.82■□□□□ 0.28
SDR39U1-219ENST00000556523 C1QL3Q5VWW1 255 aa16.82■□□□□ 0.28
SDR39U1-219ENST00000556523 PRUNE1Q86TP1 453 aa16.82■□□□□ 0.28
SDR39U1-219ENST00000556523 OR1N1Q8NGS0 311 aa16.82■□□□□ 0.28
SDR39U1-219ENST00000556523 C8orf44Q96CB5 159 aa16.82■□□□□ 0.28
SDR39U1-219ENST00000556523 ACAT2Q9BWD1 397 aa16.82■□□□□ 0.28
SDR39U1-219ENST00000556523 YIPF2Q9BWQ6 316 aa16.82■□□□□ 0.28
SDR39U1-219ENST00000556523 P2RY12Q9H244 342 aa16.82■□□□□ 0.28
SDR39U1-219ENST00000556523 C14orf105Q9NVL8 296 aa16.82■□□□□ 0.28
SDR39U1-219ENST00000556523 CDC14AQ9UNH5 594 aa16.82■□□□□ 0.28
SDR39U1-219ENST00000556523 LOC105369274A0A096LPK9 316 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 LOC102723532A0A0G2JNH3 316 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 KRT87PA6NCN2 255 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 AP3B1O00203 1094 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 HNRNPRO43390 633 aaKnown RBP16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 ZG16O60844 167 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 ETS1P14921 441 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 TNFRSF8P28908 595 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 RPA3P35244 121 aaPredicted RBP16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 CRADDP78560 199 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 BASP1P80723 227 aaKnown RBP16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 TSTA3Q13630 321 aaPredicted RBP16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 ZRSR2Q15696 482 aaKnown RBP16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 INAQ16352 499 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 MRNIPQ6NTE8 343 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 RPUSD3Q6P087 351 aaKnown RBP16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 SLC13A5Q86YT5 568 aaPredicted RBP16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 OR4N4Q8N0Y3 316 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 OR2A1Q8NGT9 310 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 C10orf90Q96M02 699 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 SLX1AQ9BQ83 275 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 DPH7Q9BTV6 452 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 IL22Q9GZX6 179 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 LZTFL1Q9NQ48 299 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 EIF2B3Q9NR50 452 aaKnown RBP16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 RIC8BQ9NVN3 520 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 BFARQ9NZS9 450 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 PTGFRNQ9P2B2 879 aa16.81■□□□□ 0.28
SDR39U1-219ENST00000556523 TRAV17A0A0B4J275 112 aa16.8■□□□□ 0.28
SDR39U1-219ENST00000556523 ARHGAP10A1A4S6 786 aa16.8■□□□□ 0.28
SDR39U1-219ENST00000556523 OR2A25A4D2G3 310 aa16.8■□□□□ 0.28
SDR39U1-219ENST00000556523 H3BMM5 538 aa16.8■□□□□ 0.28
SDR39U1-219ENST00000556523 NRP2O60462 931 aa16.8■□□□□ 0.28
SDR39U1-219ENST00000556523 PHF2O75151 1096 aa16.8■□□□□ 0.28
SDR39U1-219ENST00000556523 JRKO75564 520 aa16.8■□□□□ 0.28
SDR39U1-219ENST00000556523 KLHL18O94889 574 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms