RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 BBC3Q96PG8 261 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-217ENST00000556203 RBBP8Q99708 897 aa14.58□□□□□ -0.08
ACTN1-217ENST00000556203 HIST1H2AJQ99878 128 aa14.58□□□□□ -0.08
ACTN1-217ENST00000556203 H2AFJQ9BTM1 129 aa14.58□□□□□ -0.08
ACTN1-217ENST00000556203 DPH7Q9BTV6 452 aa14.58□□□□□ -0.08
ACTN1-217ENST00000556203 FAM129AQ9BZQ8 928 aa14.58□□□□□ -0.08
ACTN1-217ENST00000556203 CHST8Q9H2A9 424 aa14.58□□□□□ -0.08
ACTN1-217ENST00000556203 CAB39LQ9H9S4 337 aa14.58□□□□□ -0.08
ACTN1-217ENST00000556203 IKZF3Q9UKT9 509 aa14.58□□□□□ -0.08
ACTN1-217ENST00000556203 MTO1Q9Y2Z2 717 aaKnown RBP14.58□□□□□ -0.08
ACTN1-217ENST00000556203 IGKV1-8A0A0C4DH67 115 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 A0A0J9YVX5 310 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 PABPN1LA6NDY0 278 aaKnown RBP14.57□□□□□ -0.08
ACTN1-217ENST00000556203 TBPL1P62380 186 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 ABATP80404 500 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 MC1RQ01726 317 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 PRDX1Q06830 199 aaKnown RBP14.57□□□□□ -0.08
ACTN1-217ENST00000556203 CDC20Q12834 499 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 USP10Q14694 798 aaKnown RBP14.57□□□□□ -0.08
ACTN1-217ENST00000556203 SOWAHCQ53LP3 525 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-217ENST00000556203 TAF1BQ53T94 588 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-217ENST00000556203 C16orf46Q6P387 395 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 CEP128Q6ZU80 1094 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 NKAPQ8N5F7 415 aaKnown RBP14.57□□□□□ -0.08
ACTN1-217ENST00000556203 MED8Q96G25 268 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 PDLIM5Q96HC4 596 aaKnown RBP14.57□□□□□ -0.08
ACTN1-217ENST00000556203 FMO2Q99518 471 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 GPR22Q99680 433 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 SELENOSQ9BQE4 189 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 PLCD4Q9BRC7 762 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 GPR87Q9BY21 358 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 TRIM54Q9BYV2 358 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 ATG10Q9H0Y0 220 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 POPDC3Q9HBV1 291 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 GPAMQ9HCL2 828 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 CCDC177Q9NQR7 707 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-217ENST00000556203 STARD5Q9NSY2 213 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 ARL15Q9NXU5 204 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 ANKMY1Q9P2S6 941 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 SRPK3Q9UPE1 567 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 PCDHGA6Q9Y5G7 932 aa14.57□□□□□ -0.08
ACTN1-217ENST00000556203 OR2A25A4D2G3 310 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 NPEPPSL1A6NEC2 478 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 ATXN7O15265 892 aaPredicted RBP14.56□□□□□ -0.08
ACTN1-217ENST00000556203 FAM155BO75949 473 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 ITGB2P05107 769 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 ATXN8OSP0DMR3 200 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 AGXTP21549 392 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 PTPN4P29074 926 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 ECHS1P30084 290 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 AP1S2P56377 157 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 VSX2P58304 361 aaPredicted RBP14.56□□□□□ -0.08
ACTN1-217ENST00000556203 RPS15P62841 145 aaKnown RBP14.56□□□□□ -0.08
ACTN1-217ENST00000556203 ERV3-1Q14264 604 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 ATP1A1-AS1Q5TC04 95 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 GRTP1Q5TC63 336 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 C1orf189Q5VU69 101 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 PRAMEF13Q5VWM6 474 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 RHBDD2Q6NTF9 364 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 FBXO42Q6P3S6 717 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 AGTRAPQ6RW13 159 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 PCSK4Q6UW60 755 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 RNF44Q7L0R7 432 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 PAQR7Q86WK9 346 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 RELL1Q8IUW5 271 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 PROKR1Q8TCW9 393 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 ANKRD49Q8WVL7 239 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 EXTL1Q92935 676 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 ALKBH8Q96BT7 664 aaKnown RBP14.56□□□□□ -0.08
ACTN1-217ENST00000556203 TSPAN17Q96FV3 270 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 NDC1Q9BTX1 674 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 ACTL8Q9H568 366 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 UTP6Q9NYH9 597 aaKnown RBP14.56□□□□□ -0.08
ACTN1-217ENST00000556203 NINJ2Q9NZG7 142 aa14.56□□□□□ -0.08
ACTN1-217ENST00000556203 DHCR7Q9UBM7 475 aaKnown RBP14.56□□□□□ -0.08
ACTN1-217ENST00000556203 DSPP15924 2871 aaKnown RBP14.55□□□□□ -0.08
ACTN1-217ENST00000556203 LOC105369274A0A096LPK9 316 aa14.55□□□□□ -0.08
ACTN1-217ENST00000556203 LOC102723532A0A0G2JNH3 316 aa14.55□□□□□ -0.08
ACTN1-217ENST00000556203 CDC7O00311 574 aa14.55□□□□□ -0.08
ACTN1-217ENST00000556203 PHGDHO43175 533 aaKnown RBP14.55□□□□□ -0.08
ACTN1-217ENST00000556203 SRPX2O60687 465 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-217ENST00000556203 CREG1O75629 220 aa14.55□□□□□ -0.08
ACTN1-217ENST00000556203 GUCA1CO95843 209 aa14.55□□□□□ -0.08
ACTN1-217ENST00000556203 ENO2P09104 434 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-217ENST00000556203 SPRP35270 261 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-217ENST00000556203 RPS18P62269 152 aaKnown RBP14.55□□□□□ -0.08
ACTN1-217ENST00000556203 NAB1Q13506 487 aa14.55□□□□□ -0.08
ACTN1-217ENST00000556203 NAE1Q13564 534 aa14.55□□□□□ -0.08
ACTN1-217ENST00000556203 GRM7Q14831 915 aa14.55□□□□□ -0.08
ACTN1-217ENST00000556203 TBR1Q16650 682 aa14.55□□□□□ -0.08
ACTN1-217ENST00000556203 TCTE1Q5JU00 501 aa14.55□□□□□ -0.08
ACTN1-217ENST00000556203 UBAP2Q5T6F2 1119 aaKnown RBP14.55□□□□□ -0.08
ACTN1-217ENST00000556203 ZNF385CQ66K41 422 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-217ENST00000556203 FRMPD2BQ6IN97 320 aa14.55□□□□□ -0.08
ACTN1-217ENST00000556203 ZNF425Q6IV72 752 aa14.55□□□□□ -0.08
ACTN1-217ENST00000556203 FAM198BQ6UWH4 519 aa14.55□□□□□ -0.08
ACTN1-217ENST00000556203 SBSNQ6UWP8 590 aa14.55□□□□□ -0.08
ACTN1-217ENST00000556203 ADCK2Q7Z695 626 aa14.55□□□□□ -0.08
ACTN1-217ENST00000556203 OR4N4Q8N0Y3 316 aa14.55□□□□□ -0.08
ACTN1-217ENST00000556203 TTC29Q8NA56 475 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms