RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 PRPS2P11908 318 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 HSD3B1P14060 373 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 SLC2A4P14672 509 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 JUPP14923 745 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 XRCC1P18887 633 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-235ENST00000556082 SLC6A2P23975 617 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 HSD3B2P26439 372 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 ACADLP28330 430 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 HNF4AP41235 474 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 HTR6P50406 440 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 PNLIPRP1P54315 467 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 TAS2R38P59533 333 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 UFM1P61960 85 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 ABRQ12979 859 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 HTR4Q13639 388 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 GTF2H3Q13889 308 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 FLOT2Q14254 428 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 KIAA0040Q15053 153 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 CST6Q15828 149 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 RFTN2Q52LD8 501 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-235ENST00000556082 C2orf27AQ580R0 203 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.05□□□□□ -1.12
ATXN3-235ENST00000556082 AGBL4Q5VU57 503 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 IL23RQ5VWK5 629 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 RAET1GQ6H3X3 334 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 TLDC1Q6P9B6 456 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 AGTRAPQ6RW13 159 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 CYP20A1Q6UW02 462 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 SCIMPQ6UWF3 145 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 UNC5DQ6UXZ4 953 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 MBOAT1Q6ZNC8 495 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 ARPINQ7Z6K5 226 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 ZNF547Q8IVP9 402 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 SLC15A3Q8IY34 581 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 SNX31Q8N9S9 440 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 GALNT11Q8NCW6 608 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 PPFIBP2Q8ND30 876 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 OR2T3Q8NH03 318 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 OR2L2Q8NH16 312 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 DNAJB8Q8NHS0 232 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 HM13Q8TCT9 377 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 SLC26A7Q8TE54 656 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 ASB12Q8WXK4 309 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 ZUFSPQ96AP4 578 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 CCDC124Q96CT7 223 aaKnown RBP8.05□□□□□ -1.12
ATXN3-235ENST00000556082 WDR34Q96EX3 536 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 FCRL1Q96LA6 429 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 TEX37Q96LM6 180 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 GABRG3Q99928 467 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 RPP25Q9BUL9 199 aaKnown RBP8.05□□□□□ -1.12
ATXN3-235ENST00000556082 TEX101Q9BY14 249 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 VCX3BQ9H321 246 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 MUC13Q9H3R2 512 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 ACTL8Q9H568 366 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 LRTM1Q9HBL6 345 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 C1orf109Q9NX04 203 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 ADA2Q9NZK5 511 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 STOX2Q9P2F5 926 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-235ENST00000556082 ATXN10Q9UBB4 475 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 KLQ9UEF7 1012 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 ZNF490Q9ULM2 529 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-235ENST00000556082 PSMD13Q9UNM6 376 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 SLC22A14Q9Y267 594 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 TMED5Q9Y3A6 229 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 C2orf16Q68DN1 1984 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 KIAA1549LQ6ZVL6 1849 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 ATG2AQ2TAZ0 1938 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 ASPDHA6ND91 283 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 PRORSD1PA6NEY8 169 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 CCDC154A6NI56 674 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 H0YIV9 168 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 K7ESM1 405 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 INPP4BO15327 924 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 DNAJA2O60884 412 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 KCNJ13O60928 360 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 C8BP07358 591 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 G6PDP11413 515 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 ACADSP16219 412 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 ZNF8P17098 575 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-235ENST00000556082 ATP6V1C1P21283 382 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 MAPK1P28482 360 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 IL12AP29459 219 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 TRIM23P36406 574 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 LTBRP36941 435 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 HSD17B2P37059 387 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 ARL1P40616 181 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-235ENST00000556082 HNRNPFP52597 415 aaKnown RBP8.04□□□□□ -1.12
ATXN3-235ENST00000556082 CLDN8P56748 225 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 EEFSECP57772 596 aaKnown RBP8.04□□□□□ -1.12
ATXN3-235ENST00000556082 C21orf58P58505 322 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 RPS14P62263 151 aaKnown RBP8.04□□□□□ -1.12
ATXN3-235ENST00000556082 RHDQ02161 417 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 DLX2Q07687 328 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-235ENST00000556082 BNIP2Q12982 314 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 CSTF3Q12996 717 aaKnown RBP8.04□□□□□ -1.12
ATXN3-235ENST00000556082 FXNQ16595 210 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 CACHD1Q5VU97 1274 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 FAM219BQ5XKK7 198 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 FRG2Q64ET8 278 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 ZNF776Q68DI1 518 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms