RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 KDM1AO60341 852 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 FKBP9O95302 570 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 APOA4P06727 396 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 PRR35P0CG20 571 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ERGP11308 486 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 GRNP28799 593 aaKnown RBP13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 CETN2P41208 172 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 KCNK10P57789 538 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 SRSF11Q05519 484 aaKnown RBP13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 FAM214AQ32MH5 1076 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 FASTKD1Q53R41 847 aaKnown RBP13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 SP5Q6BEB4 398 aaPredicted RBP13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 NLRP9Q7RTR0 991 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 PEX26Q7Z412 305 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 PRSS58Q8IYP2 241 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 AMER3Q8N944 861 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 RELTQ969Z4 430 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 EPS8L2Q9H6S3 715 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ZNF304Q9HCX3 659 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 INTS7Q9NVH2 962 aaKnown RBP13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 PLA2G3Q9NZ20 509 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 IL1RAPL1Q9NZN1 696 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 GALPQ9UBC7 116 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ZC3H7BQ9UGR2 993 aaKnown RBP13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 C3orf18Q9UK00 162 aa13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 MRPS2Q9Y399 296 aaKnown RBP13.68□□□□□ -0.22
CHMP4BP1-201ENST00000556017 GOLGA6L9A6NEM1 432 aa13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 MIF4GDA9UHW6 222 aaKnown RBP13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 FFAR3O14843 346 aa13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 GPR42O15529 346 aa13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 HNRNPRO43390 633 aaKnown RBP13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 JRKO75564 520 aa13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 MATN4O95460 622 aa13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 RPN2P04844 631 aa13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ACPPP15309 386 aa13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 STIP1P31948 543 aaKnown RBP13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 FDFT1P37268 417 aa13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 TNFSF10P50591 281 aa13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 NAP1L1P55209 391 aaKnown RBP13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 CRADDP78560 199 aa13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 SIX1Q15475 284 aaPredicted RBP13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 FJX1Q86VR8 437 aa13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 TTC29Q8NA56 475 aaPredicted RBP13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 OR1N1Q8NGS0 311 aa13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 BRIX1Q8TDN6 353 aaKnown RBP13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 RAD51AP1Q96B01 352 aa13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 CATSPERZQ9NTU4 200 aa13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 SLC39A10Q9ULF5 831 aa13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 TTC7AQ9ULT0 858 aaPredicted RBP13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 CAPN6Q9Y6Q1 641 aa13.67□□□□□ -0.22
CHMP4BP1-201ENST00000556017 CACNA1CQ13936 2221 aa13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ARHGAP10A1A4S6 786 aa13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 IDSB3KWA1 339 aa13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 H0YGG7 62 aa13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 CD3EAPO15446 510 aaKnown RBP13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 FOXS1O43638 330 aa13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 RPS3P23396 243 aaKnown RBP eCLIP13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 MST1P26927 711 aa13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 NMBRP28336 390 aa13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ZNF75DP51815 510 aa13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ARF3P61204 181 aaPredicted RBP13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 PRAMEP78395 509 aa13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 KCTD19Q17RG1 926 aaPredicted RBP13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 SKOR2Q2VWA4 1001 aaPredicted RBP13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 PRMT9Q6P2P2 845 aa13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 UBL4BQ8N7F7 174 aa13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 C1orf54Q8WWF1 131 aa13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ITLN2Q8WWU7 325 aaPredicted RBP13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 NR4A3Q92570 626 aa13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 HAS2Q92819 552 aa13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 MIEF2Q96C03 454 aa13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 RAB6BQ9NRW1 208 aa13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 OLAHQ9NV23 265 aa13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ZNF282Q9UDV7 671 aaPredicted RBP13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 SCN3AQ9NY46 2000 aa13.66□□□□□ -0.22
CHMP4BP1-201ENST00000556017 LOC102723996A0A087X1L8 192 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 IGHV1-45A0A0A0MS14 117 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 IFNB1P01574 187 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ZSCAN5DPP0CG00 497 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 PTMSP20962 102 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 RPL22P35268 128 aaKnown RBP13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 SLC26A3P40879 764 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 CARSP49589 748 aaKnown RBP13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 PER3P56645 1201 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 DSG2Q14126 1118 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 PCOLCEQ15113 449 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 HKDC1Q2TB90 917 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 ZNF425Q6IV72 752 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 CNSTQ6PJW8 725 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 FAM180AQ6UWF9 173 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 PPP1R21Q6ZMI0 780 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 NDUFAF7Q7L592 441 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 PAQR7Q86WK9 346 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 KBTBD2Q8IY47 623 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 SIRT6Q8N6T7 355 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 BCORP1Q8N888 145 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 LPGAT1Q92604 370 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 IMMP1LQ96LU5 166 aa13.65□□□□□ -0.22
CHMP4BP1-201ENST00000556017 TTC1Q99614 292 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms