RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	NCOA7	Q8NI08	942 aa		4.03	□□□□□ -1.76
KTN1-222	ENST00000555506	OLIG1	Q8TAK6	271 aa		4.03	□□□□□ -1.76
KTN1-222	ENST00000555506	SPATA20	Q8TB22	786 aa		4.03	□□□□□ -1.76
KTN1-222	ENST00000555506	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.03	□□□□□ -1.76
KTN1-222	ENST00000555506	AK8	Q96MA6	479 aa		4.03	□□□□□ -1.76
KTN1-222	ENST00000555506	KLHL5	Q96PQ7	755 aa		4.03	□□□□□ -1.76
KTN1-222	ENST00000555506	MEIS3	Q99687	375 aa		4.03	□□□□□ -1.76
KTN1-222	ENST00000555506	LSG1	Q9H089	658 aa	Known RBP	4.03	□□□□□ -1.76
KTN1-222	ENST00000555506	HIPK2	Q9H2X6	1198 aa		4.03	□□□□□ -1.76
KTN1-222	ENST00000555506	SRD5A3	Q9H8P0	318 aa		4.03	□□□□□ -1.76
KTN1-222	ENST00000555506	MID1IP1	Q9NPA3	183 aa		4.03	□□□□□ -1.76
KTN1-222	ENST00000555506	FAF1	Q9UNN5	650 aa	Predicted RBP	4.03	□□□□□ -1.76
KTN1-222	ENST00000555506	ACE	P12821	1306 aa		4.03	□□□□□ -1.76
KTN1-222	ENST00000555506	LOC101059948	A0A1B0GTJ6	334 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	ANKRD61	A6NGH8	418 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	KBTBD13	C9JR72	458 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	CTDSPL	O15194	276 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	PRKRA	O75569	313 aa	Known RBP	4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	SNRNP70	P08621	437 aa	Known RBP	4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	ANKRD34C	P0C6C1	535 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	UROS	P10746	265 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	PLA2G2A	P14555	144 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	HLA-DPA1	P20036	260 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	NR1D1	P20393	614 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	CA4	P22748	312 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	DGKA	P23743	735 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	CD27	P26842	260 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	ATP6V1E1	P36543	226 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	CASP3	P42574	277 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	KHK	P50053	298 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	CDH11	P55287	796 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	SULT2A1	Q06520	285 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	TAF10	Q12962	218 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	NONO	Q15233	471 aa	Known RBP eCLIP	4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	IZUMO4	Q1ZYL8	232 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	DCAF10	Q5QP82	559 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	TMEM270	Q6UE05	265 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	BTNL8	Q6UX41	500 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	FOXL2NB	Q6ZUU3	175 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	IL17REL	Q6ZVW7	336 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	ANO5	Q75V66	913 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	KCTD9	Q7L273	389 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	RTN4RL2	Q86UN3	420 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	EXOC3L1	Q86VI1	746 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	CREBRF	Q8IUR6	639 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	MAPKAPK5-AS1	Q8N8E1	139 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	ARL10	Q8N8L6	244 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	AMER3	Q8N944	861 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	KBTBD3	Q8NAB2	608 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	OR10Q1	Q8NGQ4	319 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	PYCR2	Q96C36	320 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	SGF29	Q96ES7	293 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	PGM2	Q96G03	612 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	PDLIM5	Q96HC4	596 aa	Known RBP	4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	ST6GAL2	Q96JF0	529 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	URM1	Q9BTM9	101 aa	Known RBP	4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	SLC5A7	Q9GZV3	580 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	ZMYND12	Q9H0C1	365 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	SDR39U1	Q9NRG7	319 aa	Predicted RBP	4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	FGF21	Q9NSA1	209 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	TMEM161A	Q9NX61	479 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	PKD2L2	Q9NZM6	624 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	LRP12	Q9Y561	859 aa		4.02	□□□□□ -1.77
KTN1-222	ENST00000555506	TRIP12	Q14669	1992 aa	Predicted RBP	4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	C16orf97	H3BN30	126 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	PRKN	O60260	465 aa	Predicted RBP	4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	KERA	O60938	352 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	PNP	P00491	289 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	NR3C1	P04150	777 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	SERPING1	P05155	500 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	STAG3L1	P0CL83	205 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	C8orf89	P0DMQ9	161 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	TGFB3	P10600	412 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	CETP	P11597	493 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	CDH3	P22223	829 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	NPBWR1	P48145	328 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	CACNG1	Q06432	222 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	TEF	Q10587	303 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	ILF3	Q12906	894 aa	Known RBP eCLIP	4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	RPA4	Q13156	261 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	RBBP7	Q16576	425 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	OR4A47	Q6IF82	309 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	FAM166A	Q6J272	317 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	PODNL1	Q6PEZ8	512 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	ANKRD33	Q7Z3H0	272 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	PIGW	Q7Z7B1	504 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	NFE4	Q86UQ8	179 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	DNAJC22	Q8N4W6	341 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	OR13A1	Q8NGR1	328 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	OR52N5	Q8NH56	324 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	SLC26A7	Q8TE54	656 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	UBLCP1	Q8WVY7	318 aa	Predicted RBP	4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	SNX21	Q969T3	373 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	NSL1	Q96IY1	281 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	THOC3	Q96J01	351 aa	Known RBP	4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	GDAP1L1	Q96MZ0	367 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	ATG101	Q9BSB4	218 aa		4.01	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms