RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 SLMAPQ14BN4 828 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 NONOQ15233 471 aaKnown RBP eCLIP4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 ODF2Q5BJF6 829 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 FAM76BQ5HYJ3 339 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 CASC4Q6P4E1 433 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 RBMS3Q6XE24 437 aaKnown RBP4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 C15orf39Q6ZRI6 1047 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 LINC00696Q6ZRV3 163 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 TRMT1LQ7Z2T5 733 aaKnown RBP4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 NUP93Q8N1F7 819 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 ZNF383Q8NA42 475 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 OR10Q1Q8NGQ4 319 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 GRK7Q8WTQ7 553 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 RIT1Q92963 219 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 P2RX5Q93086 422 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 AK8Q96MA6 479 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 UHRF2Q96PU4 802 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 RSPH9Q9H1X1 276 aaPredicted RBP4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 CPVLQ9H3G5 476 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 P4HTMQ9NXG6 502 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 RIPK3Q9Y572 518 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 IGHV4-61A0A0C4DH41 118 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 A0A0G2JLW4 131 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 FLRT2O43155 660 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 CIDEAO60543 219 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 LMX1BO60663 402 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 IGHV4-59P01825 116 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 APOHP02749 345 aaPredicted RBP4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 EDN1P05305 212 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 GP1BBP13224 206 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 CEACAM8P31997 349 aaPredicted RBP4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 SULT2A1Q06520 285 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 RASGEF1BQ0VAM2 473 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 NFE2L1Q14494 772 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 RBBP7Q16576 425 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 LBHQ53QV2 105 aaPredicted RBP4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 C18orf65Q6ZTR6 163 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 PIWIL3Q7Z3Z3 882 aaKnown RBP4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 TRPT1Q86TN4 253 aaKnown RBP4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 OR13C3Q8NGS6 347 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 CTCFLQ8NI51 663 aaPredicted RBP4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 FIBINQ8TAL6 211 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 FCAMRQ8WWV6 532 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 PYCR2Q96C36 320 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 MAP3K3Q99759 626 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 PITPNM3Q9BZ71 974 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 OR2B2Q9GZK3 357 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 ACTL8Q9H568 366 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 TUFT1Q9NNX1 390 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 ABCB8Q9NUT2 735 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 PKD2L2Q9NZM6 624 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 ICAM5Q9UMF0 924 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 CHKBQ9Y259 395 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 IGSF1Q8N6C5 1336 aa4.92□□□□□ -1.62
CKS1BP1-201ENST00000555221 A4D1N5 150 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 SMIM1B2RUZ4 78 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 FAM72CH0Y354 149 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 SLC22A2O15244 555 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 SELENOFO60613 162 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 SLC22A3O75751 556 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 DFFBO76075 338 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 PLGP00747 810 aaPredicted RBP4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 FRMD6-AS1P0C7T7 363 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 STAG3L1P0CL83 205 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 LBPP18428 481 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 TRAP1Q12931 704 aaKnown RBP4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 TAZQ16635 292 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 STPG1Q5TH74 334 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 FAM72AQ5TYM5 149 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 LYSMD4Q5XG99 296 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 FAM72DQ6L9T8 149 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 CEACAM20Q6UY09 585 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 GBP6Q6ZN66 633 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 FAM72BQ86X60 149 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 TUSC5Q8IXB3 177 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 CCDC170Q8IYT3 715 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 OR7G3Q8NG95 312 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 TSACCQ96A04 125 aaPredicted RBP4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 INPP4AQ96PE3 977 aaPredicted RBP4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 UTP14AQ9BVJ6 771 aaKnown RBP4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 CDK19Q9BWU1 502 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 FUT8Q9BYC5 575 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 SDCBP2Q9H190 292 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 TMEM206Q9H813 350 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 WWOXQ9NZC7 414 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 SEPT10Q9P0V9 454 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 ZNF624Q9P2J8 865 aaPredicted RBP4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 ZNF580Q9UK33 172 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 MAN1B1Q9UKM7 699 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 GRID1Q9ULK0 1009 aa4.91□□□□□ -1.62
CKS1BP1-201ENST00000555221 F8VVB4 439 aa4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 F8VWA3 439 aa4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 SLC33A1O00400 549 aaPredicted RBP4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 PRAF2O60831 178 aa4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 IGLV2-11P01706 119 aa4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 VDRP11473 427 aa4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 ANOS1P23352 680 aa4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 CD27P26842 260 aa4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 PSMB4P28070 264 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms