RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 APOA4P06727 396 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 MYBL1P10243 752 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 CETPP11597 493 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 IL9P15248 144 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 PFKFB1P16118 471 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF23P17027 643 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 GM2AP17900 193 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 DNASE1P24855 282 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 GABRA5P31644 462 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 ARCN1P48444 511 aaKnown RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 CCR3P51677 355 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 PPP5CP53041 499 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 TERF1P54274 439 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 CDH13P55290 713 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 ERVFC1-1P60608 527 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 CDK3Q00526 305 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 COASYQ13057 564 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 IL11RAQ14626 422 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 LETM2Q2VYF4 491 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 PARP10Q53GL7 1025 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 TCP11X2Q5H9J9 407 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 GCNT6Q5T4J0 391 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 KRT80Q6KB66 452 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 FAM171BQ6P995 826 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 RAD9BQ6WBX8 426 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 TUBA1AQ71U36 451 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 CAMKMTQ7Z624 323 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 TMCO2Q7Z6W1 182 aaPredicted RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 TICAM2Q86XR7 235 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 TC2NQ8N9U0 490 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 TDRD5Q8NAT2 981 aaKnown RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 OR10S1Q8NGN2 331 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 CFAP61Q8NHU2 1237 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 LNX1Q8TBB1 728 aaPredicted RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 SORCS1Q8WY21 1168 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 SEMA4DQ92854 862 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 SPACA9Q96E40 222 aaPredicted RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 LINGO1Q96FE5 620 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 RADILQ96JH8 1075 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 FAM81BQ96LP2 452 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 TTC14Q96N46 770 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF830Q96NB3 372 aaPredicted RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 IL17FQ96PD4 163 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 OR6C1Q96RD1 312 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 PARK7Q99497 189 aaKnown RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 TUBA1CQ9BQE3 449 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 AP1M1Q9BXS5 423 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 MOV10L1Q9BXT6 1211 aaKnown RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 GOLPH3LQ9H4A5 285 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 SLA2Q9H6Q3 261 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 FKRPQ9H9S5 495 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 EBF2Q9HAK2 575 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 LRRC4Q9HBW1 653 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 HHATLQ9HCP6 504 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 CCDC177Q9NQR7 707 aaPredicted RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 KLHL1Q9NR64 748 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 DDX25Q9UHL0 483 aaKnown RBP1.45□□□□□ -2.18
PRPF39-208ENST00000554785 DLGAP4Q9Y2H0 992 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 KNSTRNQ9Y448 316 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 UNC79Q9P2D8 2635 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 USP24Q9UPU5 2620 aa1.45□□□□□ -2.18
PRPF39-208ENST00000554785 NAV2Q8IVL1 2488 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 FLNBO75369 2602 aaKnown RBP1.44□□□□□ -2.18
PRPF39-208ENST00000554785 MYH2Q9UKX2 1941 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 FAM208BQ5VWN6 2430 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 RFX7Q2KHR2 1363 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 MED23Q9ULK4 1368 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 SDK1Q7Z5N4 2213 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 DENND3A2RUS2 1198 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 ASPDHA6ND91 283 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 HEPACAM2A8MVW5 462 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 ERVV-1B6SEH8 477 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 H7C0S8 307 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 TULP2O00295 520 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 TO15178 435 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 XRCC3O43542 346 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 GPR137BO60478 399 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 TSPAN1O60635 241 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 MED24O75448 989 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 TRUB2O95900 331 aaKnown RBP1.44□□□□□ -2.18
PRPF39-208ENST00000554785 LDLRP01130 860 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 IGKV3-20P01619 116 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 TFAP2AP05549 437 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 KRT19P08727 400 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 LINGO3P0C6S8 592 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 CSF2RAP15509 400 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 CPT2P23786 658 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 AHRP35869 848 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 GYG1P46976 350 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 FUT6P51993 359 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 GAS1P54826 345 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 HMGCS2P54868 508 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 MLLT10P55197 1068 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 TROAPQ12815 778 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 PLA2G7Q13093 441 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 NR1D2Q14995 579 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 C6orf163Q5TEZ5 329 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 SPSB3Q6PJ21 355 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 FIGLAQ6QHK4 219 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 PLXDC2Q6UX71 529 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms