RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 RIPOR1Q6ZS17 1223 aa13.53□□□□□ -0.24
CHMP1A-210ENST00000551981 VRK3Q8IV63 474 aa13.53□□□□□ -0.24
CHMP1A-210ENST00000551981 SIRT6Q8N6T7 355 aa13.53□□□□□ -0.24
CHMP1A-210ENST00000551981 FAM71DQ8N9W8 422 aa13.53□□□□□ -0.24
CHMP1A-210ENST00000551981 PSMF1Q92530 271 aa13.53□□□□□ -0.24
CHMP1A-210ENST00000551981 MRFAP1L1Q96HT8 127 aa13.53□□□□□ -0.24
CHMP1A-210ENST00000551981 CALR3Q96L12 384 aaKnown RBP13.53□□□□□ -0.24
CHMP1A-210ENST00000551981 MESP1Q9BRJ9 268 aa13.53□□□□□ -0.24
CHMP1A-210ENST00000551981 CARD6Q9BX69 1037 aa13.53□□□□□ -0.24
CHMP1A-210ENST00000551981 RIC8BQ9NVN3 520 aa13.53□□□□□ -0.24
CHMP1A-210ENST00000551981 ZC3H7BQ9UGR2 993 aaKnown RBP13.53□□□□□ -0.24
CHMP1A-210ENST00000551981 CDC14AQ9UNH5 594 aa13.53□□□□□ -0.24
CHMP1A-210ENST00000551981 IGLV3-12A0A075B6K2 115 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 A0A0J9YVX5 310 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 GOLGA6L9A6NEM1 432 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 GOT2P00505 430 aaKnown RBP13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 EMP2P54851 167 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 EEF1A2Q05639 463 aaKnown RBP13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 SPA17Q15506 151 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 FASTKD1Q53R41 847 aaKnown RBP13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 AARS2Q5JTZ9 985 aaKnown RBP13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 FRMPD2BQ6IN97 320 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 XKRXQ6PP77 449 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 DTWD1Q8N5C7 304 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 DNAAF3Q8N9W5 541 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 OR13J1Q8NGT2 312 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 OR6P1Q8NGX9 317 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 OR4L1Q8NH43 312 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 HDAC10Q969S8 669 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 RAD51AP1Q96B01 352 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 CABS1Q96KC9 395 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 MIPEPQ99797 713 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 YIPF2Q9BWQ6 316 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 RNF32Q9H0A6 362 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 C14orf105Q9NVL8 296 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 PCDHA13Q9Y5I0 950 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 KLK4Q9Y5K2 254 aa13.52□□□□□ -0.25
CHMP1A-210ENST00000551981 PCNX1Q96RV3 2341 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 IGHV1-45A0A0A0MS14 117 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 A0A1W2PQ72 361 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 IDSB3KWA1 339 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 PRICKLE3O43900 615 aaPredicted RBP13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 PRAMEF2O60811 474 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 SLCO2B1O94956 709 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 F10P00742 488 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 HEXBP07686 556 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 ICAM2P13598 275 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 AOAHP28039 575 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 CDH17Q12864 832 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 DSG2Q14126 1118 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 RNF44Q7L0R7 432 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 OR2L3Q8NG85 312 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 SKA2Q8WVK7 121 aaPredicted RBP13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 TRPC4Q9UBN4 977 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 TEKT2Q9UIF3 430 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 SH3BGRL2Q9UJC5 107 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 ANAPC5Q9UJX4 755 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 ITGB1BP2Q9UKP3 347 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 RIMKLBQ9ULI2 386 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 TFR2Q9UP52 801 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 NF1P21359 2839 aa13.51□□□□□ -0.25
CHMP1A-210ENST00000551981 LOC105369274A0A096LPK9 316 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 LOC102723532A0A0G2JNH3 316 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 ERI2A8K979 691 aaKnown RBP13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 VPS26AO75436 327 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 MED26O95402 600 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 WDPCPO95876 746 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 ESRRAP11474 423 aaPredicted RBP13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 PSMB5P28074 263 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 CCNFP41002 786 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 SMSP52788 366 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 EMP3P54852 163 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 NAP1L1P55209 391 aaKnown RBP13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 PRAMEP78395 509 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 LONRF1Q17RB8 773 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 TSTD2Q5T7W7 516 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 ABHD17BQ5VST6 288 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 HIBCHQ6NVY1 386 aaPredicted RBP13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 LAPTM4BQ86VI4 370 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 CCDC170Q8IYT3 715 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 OR4N4Q8N0Y3 316 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 TAB3Q8N5C8 712 aaPredicted RBP13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 OR52K1Q8NGK4 314 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 HMGCLL1Q8TB92 370 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 LKAAEAR1Q8TD35 194 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 MAGEC3Q8TD91 643 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 MVB12AQ96EY5 273 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 C10orf90Q96M02 699 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 FOPNLQ96NB1 174 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 PANX3Q96QZ0 392 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 ZFYVE21Q9BQ24 234 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 TRIM8Q9BZR9 551 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 SLC2A6Q9UGQ3 507 aa13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 TTC7AQ9ULT0 858 aaPredicted RBP13.5□□□□□ -0.25
CHMP1A-210ENST00000551981 OR5H15A6NDH6 313 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 IQCF5A8MTL0 148 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 KPNA5O15131 536 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 SLC19A2O60779 497 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 PHF2O75151 1096 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 KRT38O76015 456 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms