RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 OR2A25A4D2G3 310 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 PABPN1LA6NDY0 278 aaKnown RBP14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 MEN1O00255 615 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 ZNF749O43361 778 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 PIAS1O75925 651 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 ITGB2P05107 769 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 HIST1H2AGP0C0S8 130 aaPredicted RBP14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 HIST1H2ADP20671 130 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 SAT1P21673 171 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 SLC12A2P55011 1212 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 PRDX1Q06830 199 aaKnown RBP14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 PHKG1Q16816 387 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 KBTBD12Q3ZCT8 623 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 TCTE1Q5JU00 501 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 RHBDD2Q6NTF9 364 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 TMEM207Q6UWW9 146 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 MCATQ8IVS2 390 aaKnown RBP14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 CTAGE3PQ8IX95 158 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 DSELQ8IZU8 1212 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 PROKR1Q8TCW9 393 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 FBF1Q8TES7 1133 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 TTC9Q92623 222 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 MR1Q95460 341 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 CLIP3Q96DZ5 547 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 TSPAN17Q96FV3 270 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 HIST1H2AHQ96KK5 128 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 FMO2Q99518 471 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 GPR22Q99680 433 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 HIST1H2AJQ99878 128 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 H2AFJQ9BTM1 129 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 ACAT2Q9BWD1 397 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 TRIM54Q9BYV2 358 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 PCBD2Q9H0N5 130 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 GPAMQ9HCL2 828 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 SLC6A20Q9NP91 592 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 MRPS30Q9NP92 439 aaKnown RBP14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 CCDC177Q9NQR7 707 aaPredicted RBP14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 IRAK4Q9NWZ3 460 aa14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 UTP6Q9NYH9 597 aaKnown RBP14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 NOVA2Q9UNW9 492 aaKnown RBP14.8□□□□□ -0.04
PRPF40B-211ENST00000551063 SRPX2O60687 465 aaPredicted RBP14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 RECKO95980 971 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 PLA2G2AP14555 144 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 TCN2P20062 427 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 F8A1P23610 371 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 CCND1P24385 295 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 ECHS1P30084 290 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 PHBP35232 272 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 SPRP35270 261 aaPredicted RBP14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 GCGRP47871 477 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 PGGT1BP53609 377 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 TBPL1P62380 186 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 TSTA3Q13630 321 aaPredicted RBP14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 ZNF460Q14592 562 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 GRTP1Q5TC63 336 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 YOD1Q5VVQ6 348 aaPredicted RBP14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 ZNF385CQ66K41 422 aaPredicted RBP14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 AGTRAPQ6RW13 159 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 PPM1NQ8N819 430 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 PPFIBP2Q8ND30 876 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 CATSPER2Q96P56 530 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 C17orf62Q9BQA9 187 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 PLCD4Q9BRC7 762 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 DPH7Q9BTV6 452 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 GPR87Q9BY21 358 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 SPRTNQ9H040 489 aaPredicted RBP14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 CHST8Q9H2A9 424 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 NINJ2Q9NZG7 142 aa14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 MTO1Q9Y2Z2 717 aaKnown RBP14.79□□□□□ -0.04
PRPF40B-211ENST00000551063 CTSVO60911 334 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 WISP3O95389 354 aaPredicted RBP14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 CTSBP07858 339 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 RAB40ALP0C0E4 278 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 AGXTP21549 392 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 HRH2P25021 359 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 ARSFP54793 590 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 RPS15P62841 145 aaKnown RBP14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 RELAQ04206 551 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 CDC20Q12834 499 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 USP10Q14694 798 aaKnown RBP14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 ZKSCAN8Q15776 578 aaPredicted RBP14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 PPP1R3AQ16821 1122 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 THEMIS2Q5TEJ8 643 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 PRAMEF13Q5VWM6 474 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 ZNF425Q6IV72 752 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 FAM198BQ6UWH4 519 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 SBSNQ6UWP8 590 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 ADAMTSL2Q86TH1 951 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 PAQR7Q86WK9 346 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 CEP97Q8IW35 865 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 ZNF655Q8N720 491 aaPredicted RBP14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 ATL1Q8WXF7 558 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 IFT81Q8WYA0 676 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 ZFYVE21Q9BQ24 234 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 SELENOSQ9BQE4 189 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 NDC1Q9BTX1 674 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 FUT8Q9BYC5 575 aa14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 AKIRIN1Q9H9L7 192 aaPredicted RBP14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 GCN1Q92616 2671 aaKnown RBP14.78□□□□□ -0.04
PRPF40B-211ENST00000551063 IGKV1-8A0A0C4DH67 115 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms