RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 CABYRO75952 493 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 SNX4O95219 450 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 TOMM40O96008 361 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 CCNE2O96020 404 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 LDHAP00338 332 aaKnown RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 HPRP00739 348 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 S100BP04271 92 aaPredicted RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 KRT8P05787 483 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 TFPTP0C1Z6 253 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 TRAPPC2P0DI81 140 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 TRAPPC2BP0DI82 140 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 PSG1P11464 419 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 HSD17B1P14061 328 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 IL1R1P14778 569 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 PGAM1P18669 254 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 TFEBP19484 476 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 ITIH1P19827 911 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 PSMA2P25787 234 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 PSMA4P25789 261 aaKnown RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 GABRB3P28472 473 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 EPHA3P29320 983 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 CCND2P30279 289 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 SFNP31947 248 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 SPRP35270 261 aaPredicted RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 HPCAL1P37235 193 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 GP5P40197 560 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 BTDP43251 543 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 QARSP47897 775 aaKnown RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 SLC11A2P49281 568 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 KPNA2P52292 529 aaKnown RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 PPP5CP53041 499 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 PEX3P56589 373 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 SNX16P57768 344 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 EVA1CP58658 441 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 RHBDL3P58872 404 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 DEFA1P59665 94 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 DEFA3P59666 94 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 YWHAZP63104 245 aaKnown RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 BASP1P80723 227 aaKnown RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 MS4A2Q01362 244 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 CYP4A11Q02928 519 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 CFHR1Q03591 330 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 FOXM1Q08050 763 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 HSPA14Q0VDF9 509 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 SELENBP1Q13228 472 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 PMS2P3Q13401 168 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 IL18R1Q13478 541 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 ERV3-1Q14264 604 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 GK3PQ14409 553 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 SQLEQ14534 574 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 PCLAFQ15004 111 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 ACOX1Q15067 660 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 MAPRE1Q15691 268 aaKnown RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 ATP6AP1Q15904 470 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 NRF1Q16656 503 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 KCTD19Q17RG1 926 aaPredicted RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 COL24A1Q17RW2 1714 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 ZNF181Q2M3W8 571 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 PGS1Q32NB8 556 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 ZACNQ401N2 412 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 SMUG1Q53HV7 270 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 KHDC1LQ5JSQ8 128 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 WDR45BQ5MNZ6 344 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 CYP4A22Q5TCH4 519 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 GPR107Q5VW38 600 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 TTC23Q5W5X9 447 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 CES4AQ5XG92 561 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 NXNQ6DKJ4 435 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 SIGIRRQ6IA17 410 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 UGT3A1Q6NUS8 523 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 KCTD8Q6ZWB6 473 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 PRSS48Q7RTY5 328 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 LINC00523Q86TU6 105 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 CDR2LQ86X02 465 aaPredicted RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 DHFR2Q86XF0 187 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 GALNT13Q8IUC8 556 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 HERC6Q8IVU3 1022 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 C10orf107Q8IVU9 208 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 SFTPA1Q8IWL2 248 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 C4orf19Q8IY42 314 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 TBC1D21Q8IYX1 336 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 CLYBLQ8N0X4 340 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 DAW1Q8N136 415 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 GPD1LQ8N335 351 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 ZCCHC7Q8N3Z6 543 aaKnown RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 DHRSXQ8N5I4 330 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 ARL10Q8N8L6 244 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 ANKRD52Q8NB46 1076 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 TMEM161BQ8NDZ6 487 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 ZNF548Q8NEK5 533 aaPredicted RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 TRPV3Q8NET8 790 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 OSR1Q8TAX0 266 aaPredicted RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 SUN5Q8TC36 379 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 TMEM171Q8WVE6 324 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 HDAC2Q92769 488 aaKnown RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 VPS33AQ96AX1 596 aa3.23□□□□□ -1.89
CCNT1-203ENST00000550457 PPWD1Q96BP3 646 aaKnown RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 AURKBQ96GD4 344 aaPredicted RBP3.23□□□□□ -1.89
CCNT1-203ENST00000550457 CEP170P1Q96L14 293 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms