RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 APOL4Q9BPW4 351 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 GABARAPL1Q9H0R8 117 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 DSN1Q9H410 356 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 ELOVL6Q9H5J4 265 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 AMBNQ9NP70 447 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 EFCAB9A8MZ26 197 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 SMAD6O43541 496 aaKnown RBP13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 TBL1XO60907 577 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 PGLSO95336 258 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 FABP3P05413 133 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 BPIP17213 487 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 ENGP17813 658 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 IL1RNP18510 177 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 ITGALP20701 1170 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 RPS3P23396 243 aaKnown RBP eCLIP13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 RPIAP49247 311 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 RPP38P78345 283 aaKnown RBP13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 MVKQ03426 396 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 HECTD3Q5T447 861 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 PDE12Q6L8Q7 609 aaKnown RBP13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 CDC26Q8NHZ8 85 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 TPD52L3Q96J77 140 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 HSH2DQ96JZ2 352 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 CEP295NLQ96MC4 621 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 MIR1-1HGQ9H1L0 117 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 EPS8L2Q9H6S3 715 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 VPS51Q9UID3 782 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 AP3M1Q9Y2T2 418 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 ZNF451Q9Y4E5 1061 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 GPC6Q9Y625 555 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 MYO1DO94832 1006 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 KCNK5O95279 499 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 VIPP01282 170 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 MAGP20916 626 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 CD40LGP29965 261 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 C21orf33P30042 268 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 CCND3P30281 292 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 DNAJA1P31689 397 aaKnown RBP13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 LIPAP38571 399 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 SLC11A1P49279 550 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 SEPHS1P49903 392 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 ZNF621Q6ZSS3 439 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 TSPAN33Q86UF1 283 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 GALNT13Q8IUC8 556 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 MCFD2Q8NI22 146 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 UBTD2Q8WUN7 234 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 APH1BQ8WW43 257 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 DNASE1L2Q92874 299 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 DACH2Q96NX9 599 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 PANX1Q96RD7 426 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 REXO4Q9GZR2 422 aaKnown RBP13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 MBD1Q9UIS9 605 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 GLYATL1P3A0A0U1RQE8 302 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 OR2A25A4D2G3 310 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 EVPLLA8MZ36 301 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 CLIC1O00299 241 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 ALOX5P09917 674 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 GSTT2P0CG29 244 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 GSTT2BP0CG30 244 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 AQP1P29972 269 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 HNF1BP35680 557 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 COLEC12Q5KU26 742 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 KIAA1614Q5VZ46 1190 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 GPR153Q6NV75 609 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 FUT10Q6P4F1 479 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 ANKS3Q6ZW76 656 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 CHST9Q7L1S5 443 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 CLECL1Q8IZS7 167 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 BCL7BQ9BQE9 202 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 OSGIN1Q9UJX0 560 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 MICAL3Q7RTP6 2002 aa13.73□□□□□ -0.21
RAPGEF3-218ENST00000548919 FPGTO14772 594 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 CPSF4O95639 269 aaKnown RBP13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 RPLP2P05387 115 aaKnown RBP13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 ANXA5P08758 320 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 COL6A1P12109 1028 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 FPR1P21462 350 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 TPTEP56180 551 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 VMACQ2NL98 169 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 FAM26DQ5JW98 314 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 ZZZ3Q8IYH5 903 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 CHCHD4Q8N4Q1 142 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 PROX1Q92786 737 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 SLC29A3Q9BZD2 475 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 DCSTAMPQ9H295 470 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 SLC32A1Q9H598 525 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 THUMPD1Q9NXG2 353 aaKnown RBP13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 TSC22D4Q9Y3Q8 395 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 A0A1W2PQ67 120 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 SEPT4O43236 478 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 PRAMEF4O60810 478 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 NUDT7P0C024 238 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 ITPKAP23677 461 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 KDELR2P33947 212 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 CSKP41240 450 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 KIR3DL1P43629 444 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 ALDH7A1P49419 539 aaKnown RBP13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 CXCR4P61073 352 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 FKBP1BP68106 108 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 NPRL3Q12980 569 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms