RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 PCDHGA11Q9Y5H2 935 aa20.25■□□□□ 0.83
RITA1-201ENST00000548278 DNMT3AQ9Y6K1 912 aaPredicted RBP20.25■□□□□ 0.83
RITA1-201ENST00000548278 BRWD1Q9NSI6 2320 aa20.25■□□□□ 0.83
RITA1-201ENST00000548278 SPTBN5Q9NRC6 3674 aaKnown RBP20.25■□□□□ 0.83
RITA1-201ENST00000548278 ADAM23O75077 832 aa20.25■□□□□ 0.83
RITA1-201ENST00000548278 PAK4O96013 591 aaPredicted RBP20.25■□□□□ 0.83
RITA1-201ENST00000548278 HSD3B1P14060 373 aa20.25■□□□□ 0.83
RITA1-201ENST00000548278 HSD3B2P26439 372 aa20.25■□□□□ 0.83
RITA1-201ENST00000548278 DDX39BQ13838 428 aaKnown RBP20.25■□□□□ 0.83
RITA1-201ENST00000548278 STARD3Q14849 445 aa20.25■□□□□ 0.83
RITA1-201ENST00000548278 ADNP2Q6IQ32 1131 aa20.25■□□□□ 0.83
RITA1-201ENST00000548278 IL17RCQ8NAC3 791 aa20.25■□□□□ 0.83
RITA1-201ENST00000548278 OR7G3Q8NG95 312 aa20.25■□□□□ 0.83
RITA1-201ENST00000548278 LRTOMTQ8WZ04 291 aa20.25■□□□□ 0.83
RITA1-201ENST00000548278 TESCQ96BS2 214 aa20.25■□□□□ 0.83
RITA1-201ENST00000548278 WDR34Q96EX3 536 aa20.25■□□□□ 0.83
RITA1-201ENST00000548278 EFHD1Q9BUP0 239 aa20.25■□□□□ 0.83
RITA1-201ENST00000548278 C1QTNF2Q9BXJ5 285 aa20.25■□□□□ 0.83
RITA1-201ENST00000548278 WDR26Q9H7D7 661 aa20.25■□□□□ 0.83
RITA1-201ENST00000548278 PPT2Q9UMR5 302 aa20.25■□□□□ 0.83
RITA1-201ENST00000548278 ASF1AQ9Y294 204 aa20.25■□□□□ 0.83
RITA1-201ENST00000548278 PCM1Q15154 2024 aa20.24■□□□□ 0.83
RITA1-201ENST00000548278 PNLIPRP1P54315 467 aa20.24■□□□□ 0.83
RITA1-201ENST00000548278 RPS21P63220 83 aaKnown RBP20.24■□□□□ 0.83
RITA1-201ENST00000548278 KLC1Q07866 573 aa20.24■□□□□ 0.83
RITA1-201ENST00000548278 BLMHQ13867 455 aa20.24■□□□□ 0.83
RITA1-201ENST00000548278 METRNLQ641Q3 311 aa20.24■□□□□ 0.83
RITA1-201ENST00000548278 TMPRSS11BQ86T26 416 aa20.24■□□□□ 0.83
RITA1-201ENST00000548278 MSRB3Q8IXL7 192 aa20.24■□□□□ 0.83
RITA1-201ENST00000548278 TDHQ8IZJ6 230 aa20.24■□□□□ 0.83
RITA1-201ENST00000548278 KLK6Q92876 244 aa20.24■□□□□ 0.83
RITA1-201ENST00000548278 C11orf24Q96F05 449 aaPredicted RBP20.24■□□□□ 0.83
RITA1-201ENST00000548278 EGLN2Q96KS0 407 aa20.24■□□□□ 0.83
RITA1-201ENST00000548278 SLC6A17Q9H1V8 727 aa20.24■□□□□ 0.83
RITA1-201ENST00000548278 SLC25A37Q9NYZ2 338 aa20.24■□□□□ 0.83
RITA1-201ENST00000548278 A0A1W2PQF6 199 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 DHRS12A0PJE2 317 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 PLRG1O43660 514 aaKnown RBP20.23■□□□□ 0.83
RITA1-201ENST00000548278 EGFP01133 1207 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 MTHFD1P11586 935 aaKnown RBP20.23■□□□□ 0.83
RITA1-201ENST00000548278 NCK1P16333 377 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 OR4D2P58180 307 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 CATSPEREQ5SY80 951 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 SMRP1Q8NCR6 262 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 ICA1LQ8NDH6 482 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 PHC3Q8NDX5 983 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 OR5AR1Q8NGP9 310 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 FAM110BQ8TC76 370 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 GANCQ8TET4 914 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 METTL2AQ96IZ6 378 aaKnown RBP20.23■□□□□ 0.83
RITA1-201ENST00000548278 ZNF576Q9H609 170 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 SERHLQ9NQF3 203 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 LMCD1Q9NZU5 365 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 PCDHB3Q9Y5E6 796 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 TCRBV5S2A0A599 114 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 MAGEB17A8MXT2 336 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 GPR89AB7ZAQ6 455 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 ETHE1O95571 254 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 GPR89BP0CG08 455 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 UQCRBP14927 111 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 HRH2P25021 359 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 S100A3P33764 101 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 TMEM259Q4ZIN3 620 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 SDE2Q6IQ49 451 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 ADGRG5Q8IZF4 528 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 HUS1BQ8NHY5 278 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 TFGQ92734 400 aaPredicted RBP20.23■□□□□ 0.83
RITA1-201ENST00000548278 NECTIN4Q96NY8 510 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 BTBD9Q96Q07 612 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 EBPLQ9BY08 206 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 PIF1Q9H611 641 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 BATF3Q9NR55 127 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 MAN2B2Q9Y2E5 1009 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 DYRK1BQ9Y463 629 aa20.23■□□□□ 0.83
RITA1-201ENST00000548278 TRBV5-3A0A0A0MS03 114 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 KMOO15229 486 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 COL9A1P20849 921 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 TSTA3Q13630 321 aaPredicted RBP20.22■□□□□ 0.83
RITA1-201ENST00000548278 ATG9BQ674R7 924 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 HMBOX1Q6NT76 420 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 MED27Q6P2C8 311 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 OR14C36Q8NHC7 312 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 RAD51AP1Q96B01 352 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 EHD1Q9H4M9 534 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 RUVBL1Q9Y265 456 aaKnown RBP20.22■□□□□ 0.83
RITA1-201ENST00000548278 A0A1W2PQU0 124 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 PRR23AA6NEV1 266 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 EIF4E1BA6NMX2 242 aaKnown RBP20.22■□□□□ 0.83
RITA1-201ENST00000548278 TIPRLO75663 272 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 LRATO95237 230 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 PCNAP12004 261 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 KELP23276 732 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 OXTRP30559 389 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 SOX11P35716 441 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 SGCGQ13326 291 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 PON2Q15165 354 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 AASDHQ4L235 1098 aaPredicted RBP20.22■□□□□ 0.83
RITA1-201ENST00000548278 RUNDC3AQ59EK9 446 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 KIAA1161Q6NSJ0 714 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 PROSER1Q86XN7 944 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms