RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 PCMTD2Q9NV79 361 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 NINJ2Q9NZG7 142 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 MRPS18BQ9Y676 258 aaKnown RBP17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 AP1M2Q9Y6Q5 423 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 SEC16AO15027 2179 aa17.97■□□□□ 0.47
PRPF40B-206ENST00000547764 ANKRD12Q6UB98 2062 aa17.97■□□□□ 0.47
PRPF40B-206ENST00000547764 ZNF891A8MT65 544 aaPredicted RBP17.97■□□□□ 0.47
PRPF40B-206ENST00000547764 ZSCAN9O15535 394 aaPredicted RBP17.97■□□□□ 0.47
PRPF40B-206ENST00000547764 FAM155BO75949 473 aa17.97■□□□□ 0.47
PRPF40B-206ENST00000547764 KLK3P07288 261 aaPredicted RBP17.97■□□□□ 0.47
PRPF40B-206ENST00000547764 RHDQ02161 417 aa17.97■□□□□ 0.47
PRPF40B-206ENST00000547764 USP10Q14694 798 aaKnown RBP17.97■□□□□ 0.47
PRPF40B-206ENST00000547764 EFTUD2Q15029 972 aaKnown RBP eCLIP17.97■□□□□ 0.47
PRPF40B-206ENST00000547764 UBAP2Q5T6F2 1119 aaKnown RBP17.97■□□□□ 0.47
PRPF40B-206ENST00000547764 GRTP1Q5TC63 336 aa17.97■□□□□ 0.47
PRPF40B-206ENST00000547764 DSELQ8IZU8 1212 aa17.97■□□□□ 0.47
PRPF40B-206ENST00000547764 ZNF655Q8N720 491 aaPredicted RBP17.97■□□□□ 0.47
PRPF40B-206ENST00000547764 TSPYL1Q9H0U9 437 aa17.97■□□□□ 0.47
PRPF40B-206ENST00000547764 ATG10Q9H0Y0 220 aa17.97■□□□□ 0.47
PRPF40B-206ENST00000547764 IRAK4Q9NWZ3 460 aa17.97■□□□□ 0.47
PRPF40B-206ENST00000547764 IGKV1-8A0A0C4DH67 115 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 OR2A25A4D2G3 310 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 CDC7O00311 574 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 NKX2-8O15522 239 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 KATNA1O75449 491 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 CCNDBP1O95273 360 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 WISP3O95389 354 aaPredicted RBP17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 HBQ1P09105 142 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 SPRP35270 261 aaPredicted RBP17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 TBPL1P62380 186 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 NAB1Q13506 487 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 DNASE1L3Q13609 305 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 COL9A2Q14055 689 aaPredicted RBP17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 NAA25Q14CX7 972 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 THEMIS2Q5TEJ8 643 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 LCN10Q6JVE6 187 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 TLDC1Q6P9B6 456 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 AGTRAPQ6RW13 159 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 SBSNQ6UWP8 590 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 LRRN4CLQ8ND94 238 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 STARD8Q92502 1023 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 ANKRD7Q92527 254 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 TSPAN17Q96FV3 270 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 UBL7Q96S82 380 aaPredicted RBP17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 RUFY1Q96T51 708 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 PLCD4Q9BRC7 762 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 TRIM54Q9BYV2 358 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 CHST8Q9H2A9 424 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 CCDC177Q9NQR7 707 aaPredicted RBP17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 ARL15Q9NXU5 204 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 KCND3Q9UK17 655 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 PCDHGA6Q9Y5G7 932 aa17.96■□□□□ 0.47
PRPF40B-206ENST00000547764 A0A0J9YVX5 310 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 C21orf140B9A014 251 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 PHGDHO43175 533 aaKnown RBP17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 ENO2P09104 434 aaPredicted RBP17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 RHOXF2BP0C7M4 288 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 STMN1P16949 149 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 PHBP35232 272 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 AP1S2P56377 157 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 ABATP80404 500 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 NAE1Q13564 534 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 ZXDCQ2QGD7 858 aaPredicted RBP17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 PTCHD3Q3KNS1 767 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 RHBDD2Q6NTF9 364 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 FBXO42Q6P3S6 717 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 RNF44Q7L0R7 432 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 TTC9Q92623 222 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 MED8Q96G25 268 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 ZNF285Q96NJ3 590 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 SELENOSQ9BQE4 189 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 RHOXF2Q9BQY4 288 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 CDC42EP4Q9H3Q1 356 aaKnown RBP17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 STARD5Q9NSY2 213 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 ANKMY1Q9P2S6 941 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 NOVA2Q9UNW9 492 aaKnown RBP17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 IGSF10Q6WRI0 2623 aa17.95■□□□□ 0.46
PRPF40B-206ENST00000547764 LOC105369274A0A096LPK9 316 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 LOC102723532A0A0G2JNH3 316 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 PABPN1LA6NDY0 278 aaKnown RBP17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 NPEPPSL1A6NEC2 478 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 ERVH48-1M5A8F1 160 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 SRPX2O60687 465 aaPredicted RBP17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 GUCA1CO95843 209 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 GCGRP47871 477 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 VSX2P58304 361 aaPredicted RBP17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 ZKSCAN8Q15776 578 aaPredicted RBP17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 PPP1R3AQ16821 1122 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 TCTE1Q5JU00 501 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 PRAMEF13Q5VWM6 474 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 ZNF385CQ66K41 422 aaPredicted RBP17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 FRMPD2BQ6IN97 320 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 ZNF425Q6IV72 752 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 PAQR7Q86WK9 346 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 IFT20Q8IY31 132 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 OR4N4Q8N0Y3 316 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 SPATA6LQ8N4H0 392 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 ALKBH8Q96BT7 664 aaKnown RBP17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 MRRFQ96E11 262 aaKnown RBP17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 BBC3Q96PG8 261 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms