RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 LINC00346Q8IVM7 164 aa3.29□□□□□ -1.88
CCDC38-204ENST00000546816 MMD2Q8IY49 270 aa3.29□□□□□ -1.88
CCDC38-204ENST00000546816 ABHD12Q8N2K0 398 aa3.29□□□□□ -1.88
CCDC38-204ENST00000546816 ZNF622Q969S3 477 aaKnown RBP eCLIP3.29□□□□□ -1.88
CCDC38-204ENST00000546816 SPACA9Q96E40 222 aaPredicted RBP3.29□□□□□ -1.88
CCDC38-204ENST00000546816 PDLIM5Q96HC4 596 aaKnown RBP3.29□□□□□ -1.88
CCDC38-204ENST00000546816 SFXN2Q96NB2 322 aa3.29□□□□□ -1.88
CCDC38-204ENST00000546816 OVOL2Q9BRP0 275 aa3.29□□□□□ -1.88
CCDC38-204ENST00000546816 RPP25Q9BUL9 199 aaKnown RBP3.29□□□□□ -1.88
CCDC38-204ENST00000546816 MYNNQ9NPC7 610 aa3.29□□□□□ -1.88
CCDC38-204ENST00000546816 GPR83Q9NYM4 423 aa3.29□□□□□ -1.88
CCDC38-204ENST00000546816 CRNNQ9UBG3 495 aaPredicted RBP3.29□□□□□ -1.88
CCDC38-204ENST00000546816 RSF1Q96T23 1441 aaPredicted RBP3.28□□□□□ -1.88
CCDC38-204ENST00000546816 IGLV3-10A0A075B6K4 115 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 ACOD1A6NK06 481 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 KLLNB2CW77 178 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 H0YAE9 185 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 TEX28O15482 410 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 ENTPD3O75355 529 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 SOX3P41225 446 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 STAT2P52630 851 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 FAM198BQ6UWH4 519 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 ZNF584Q8IVC4 421 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 MCUQ8NE86 351 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 ZPLD1Q8TCW7 415 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 SYN2Q92777 582 aaPredicted RBP3.28□□□□□ -1.88
CCDC38-204ENST00000546816 SLC22A18Q96BI1 424 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 CNRIP1Q96F85 164 aaPredicted RBP3.28□□□□□ -1.88
CCDC38-204ENST00000546816 ATXN7L3BQ96GX2 97 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 C4orf45Q96LM5 186 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 LPAR4Q99677 370 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 TDRD1Q9BXT4 1180 aaKnown RBP3.28□□□□□ -1.88
CCDC38-204ENST00000546816 PUS3Q9BZE2 481 aaKnown RBP3.28□□□□□ -1.88
CCDC38-204ENST00000546816 CTSZQ9UBR2 303 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 ABT1Q9ULW3 272 aaKnown RBP3.28□□□□□ -1.88
CCDC38-204ENST00000546816 ZNF510Q9Y2H8 683 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 WIPI2Q9Y4P8 454 aa3.28□□□□□ -1.88
CCDC38-204ENST00000546816 A0A087WUV0 522 aaPredicted RBP3.27□□□□□ -1.89
CCDC38-204ENST00000546816 A0A1W2PPQ1 181 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 ARPC2O15144 300 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 CEACAM4O75871 244 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 HPRP00739 348 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 THEGLP0DJG4 465 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 CSH1P0DML2 217 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 CSH2P0DML3 217 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 FOLR2P14207 255 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 RPL35AP18077 110 aaKnown RBP3.27□□□□□ -1.89
CCDC38-204ENST00000546816 BCL3P20749 454 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 PAX3P23760 479 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 IL4RP24394 825 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 PTGER4P35408 488 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 MAPK12P53778 367 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 ZFP36L1Q07352 338 aaKnown RBP3.27□□□□□ -1.89
CCDC38-204ENST00000546816 CDH18Q13634 790 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 TAB1Q15750 504 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 CBWD6Q4V339 395 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 CBWD3Q5JTY5 395 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 FAM205BPQ63HN1 556 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 LGI2Q8N0V4 545 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 METTL4Q8N3J2 472 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 MINDY1Q8N5J2 469 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 CHPT1Q8WUD6 406 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 NXNL1Q96CM4 212 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 THOC1Q96FV9 657 aaKnown RBP3.27□□□□□ -1.89
CCDC38-204ENST00000546816 ZNF577Q9BSK1 485 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 TEX12Q9BXU0 123 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 HOXD1Q9GZZ0 328 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 B3GAT2Q9NPZ5 323 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 PRMT7Q9NVM4 692 aaPredicted RBP3.27□□□□□ -1.89
CCDC38-204ENST00000546816 HAUS2Q9NVX0 235 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 GDE1Q9NZC3 331 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 THAP10Q9P2Z0 257 aaPredicted RBP3.27□□□□□ -1.89
CCDC38-204ENST00000546816 C19orf25Q9UFG5 118 aaPredicted RBP3.27□□□□□ -1.89
CCDC38-204ENST00000546816 R4GN57 208 aa3.27□□□□□ -1.89
CCDC38-204ENST00000546816 ZNF646O15015 1829 aaPredicted RBP3.27□□□□□ -1.89
CCDC38-204ENST00000546816 TRBV5-5A0A0J9YX44 114 aa3.26□□□□□ -1.89
CCDC38-204ENST00000546816 O00370 1275 aa3.26□□□□□ -1.89
CCDC38-204ENST00000546816 TRA2BP62995 288 aaKnown RBP3.26□□□□□ -1.89
CCDC38-204ENST00000546816 IRX4P78413 519 aa3.26□□□□□ -1.89
CCDC38-204ENST00000546816 CD300CQ08708 224 aa3.26□□□□□ -1.89
CCDC38-204ENST00000546816 EPS8Q12929 822 aa3.26□□□□□ -1.89
CCDC38-204ENST00000546816 ITGA7Q13683 1181 aa3.26□□□□□ -1.89
CCDC38-204ENST00000546816 BAATQ14032 418 aaPredicted RBP3.26□□□□□ -1.89
CCDC38-204ENST00000546816 MFSD12Q6NUT3 480 aa3.26□□□□□ -1.89
CCDC38-204ENST00000546816 NOTUMQ6P988 496 aa3.26□□□□□ -1.89
CCDC38-204ENST00000546816 ZFAND4Q86XD8 727 aa3.26□□□□□ -1.89
CCDC38-204ENST00000546816 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.26□□□□□ -1.89
CCDC38-204ENST00000546816 SLC37A3Q8NCC5 494 aa3.26□□□□□ -1.89
CCDC38-204ENST00000546816 CFAP61Q8NHU2 1237 aa3.26□□□□□ -1.89
CCDC38-204ENST00000546816 NSUN4Q96CB9 384 aaKnown RBP3.26□□□□□ -1.89
CCDC38-204ENST00000546816 MTMR12Q9C0I1 747 aa3.26□□□□□ -1.89
CCDC38-204ENST00000546816 GOLPH3LQ9H4A5 285 aa3.26□□□□□ -1.89
CCDC38-204ENST00000546816 GIMAP4Q9NUV9 329 aa3.26□□□□□ -1.89
CCDC38-204ENST00000546816 WDR83OSQ9Y284 106 aa3.26□□□□□ -1.89
CCDC38-204ENST00000546816 FSD2A1L4K1 749 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 A8MXK9 166 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 TSPAN9O75954 239 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 IGKV3-15P01624 115 aa3.25□□□□□ -1.89
CCDC38-204ENST00000546816 HOXD4P09016 255 aaPredicted RBP3.25□□□□□ -1.89
CCDC38-204ENST00000546816 PDHA2P29803 388 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms