RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 FAM95CA0A1B0GW59 222 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 CTAGE15A4D2H0 777 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 FAM159BA6NKW6 160 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 SRPX2O60687 465 aaPredicted RBP11.39□□□□□ -0.59
YBX3-217ENST00000546164 CTSVO60911 334 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 CCNDBP1O95273 360 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 CAPN1P07384 714 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 CTSBP07858 339 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 CTAGE8P0CG41 777 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 ZNF37AP17032 561 aaPredicted RBP11.39□□□□□ -0.59
YBX3-217ENST00000546164 PTPN4P29074 926 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 RPA3P35244 121 aaPredicted RBP11.39□□□□□ -0.59
YBX3-217ENST00000546164 MAGEA4P43358 317 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 GPX6P59796 221 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 SLC7A5Q01650 507 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 PRDX1Q06830 199 aaKnown RBP11.39□□□□□ -0.59
YBX3-217ENST00000546164 LINC00303Q3SY05 128 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 TCTE1Q5JU00 501 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 YOD1Q5VVQ6 348 aaPredicted RBP11.39□□□□□ -0.59
YBX3-217ENST00000546164 ICE2Q659A1 982 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 FAM199XQ6PEV8 388 aaPredicted RBP11.39□□□□□ -0.59
YBX3-217ENST00000546164 FAM198BQ6UWH4 519 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 SUSD1Q6UWL2 747 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 C3orf62Q6ZUJ4 267 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 CTAGE6Q86UF2 777 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 CTAGE4Q8IX94 777 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 KIF18AQ8NI77 898 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 ANKRD7Q92527 254 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 EXTL1Q92935 676 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 CLIP3Q96DZ5 547 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 VPS39Q96JC1 886 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 GBP5Q96PP8 586 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 CPNE1Q99829 537 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 C17orf62Q9BQA9 187 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 NLNQ9BYT8 704 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 POPDC3Q9HBV1 291 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 SLC6A20Q9NP91 592 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 STOX2Q9P2F5 926 aaPredicted RBP11.39□□□□□ -0.59
YBX3-217ENST00000546164 TAC3Q9UHF0 121 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 ADAMTS6Q9UKP5 1117 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 MRPS18BQ9Y676 258 aaKnown RBP11.39□□□□□ -0.59
YBX3-217ENST00000546164 BSNQ9UPA5 3926 aa11.39□□□□□ -0.59
YBX3-217ENST00000546164 IGKV1-8A0A0C4DH67 115 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 ESYT3A0FGR9 886 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 FITM1A5D6W6 292 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 CXorf49A8MYA2 514 aaPredicted RBP11.38□□□□□ -0.59
YBX3-217ENST00000546164 KATNA1O75449 491 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 CREG1O75629 220 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 SYF2O95926 243 aaKnown RBP11.38□□□□□ -0.59
YBX3-217ENST00000546164 ONECUT2O95948 504 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 ENO2P09104 434 aaPredicted RBP11.38□□□□□ -0.59
YBX3-217ENST00000546164 AGXTP21549 392 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 GP5P40197 560 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 ARSFP54793 590 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 AP1S2P56377 157 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 TAS2R39P59534 338 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 RPS15P62841 145 aaKnown RBP11.38□□□□□ -0.59
YBX3-217ENST00000546164 YBX1P67809 324 aaKnown RBP11.38□□□□□ -0.59
YBX3-217ENST00000546164 NCF4Q15080 339 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 PHKG1Q16816 387 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 GLE1Q53GS7 698 aaKnown RBP11.38□□□□□ -0.59
YBX3-217ENST00000546164 ZNF425Q6IV72 752 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 LCN10Q6JVE6 187 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 BORAQ6PGQ7 559 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 TMEM207Q6UWW9 146 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 CAPN12Q6ZSI9 719 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 SYVN1Q86TM6 617 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 PAQR7Q86WK9 346 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 RELL1Q8IUW5 271 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 NKAPQ8N5F7 415 aaKnown RBP11.38□□□□□ -0.59
YBX3-217ENST00000546164 ZNF655Q8N720 491 aaPredicted RBP11.38□□□□□ -0.59
YBX3-217ENST00000546164 NOA1Q8NC60 698 aaKnown RBP11.38□□□□□ -0.59
YBX3-217ENST00000546164 RUFY1Q96T51 708 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 PLCD4Q9BRC7 762 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 DPH7Q9BTV6 452 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 NDC1Q9BTX1 674 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 DHRS4Q9BTZ2 278 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 ACAT2Q9BWD1 397 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 SLC7A5P2Q9GIP4 190 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 PCBD2Q9H0N5 130 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 ACTL8Q9H568 366 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 LRRC4CQ9HCJ2 640 aa11.38□□□□□ -0.59
YBX3-217ENST00000546164 MRPS30Q9NP92 439 aaKnown RBP11.38□□□□□ -0.59
YBX3-217ENST00000546164 NOVA2Q9UNW9 492 aaKnown RBP11.38□□□□□ -0.59
YBX3-217ENST00000546164 FARSAQ9Y285 508 aaKnown RBP11.38□□□□□ -0.59
YBX3-217ENST00000546164 ZNF462Q96JM2 2506 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 PIAS1O75925 651 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 WISP3O95389 354 aaPredicted RBP11.37□□□□□ -0.59
YBX3-217ENST00000546164 HIST1H2AGP0C0S8 130 aaPredicted RBP11.37□□□□□ -0.59
YBX3-217ENST00000546164 PRKAR1AP10644 381 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 HIST1H2ADP20671 130 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 CCND1P24385 295 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 HRH2P25021 359 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 STX2P32856 288 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 PGGT1BP53609 377 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 TBPL1P62380 186 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 POU4F1Q01851 419 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 NAB1Q13506 487 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 GRM7Q14831 915 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 PPP1R3AQ16821 1122 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms