RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CEP19Q96LK0 163 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 CHCHD6Q9BRQ6 235 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 APOL5Q9BWW9 433 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 TRPS1Q9UHF7 1281 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 TNFRSF10AO00220 468 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 INSIG1O15503 277 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 TLL1O43897 1013 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 B3GALT4O96024 378 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 ETV6P41212 452 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 MAGEA11P43364 429 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 SLC15A1P46059 708 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 ITGA1P56199 1179 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 CLDN8P56748 225 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 FBXO43Q4G163 708 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 PRR23CQ6ZRP0 262 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 ZNF551Q7Z340 670 aaPredicted RBP13.81□□□□□ -0.2
SRP54-202ENST00000546080 SERPINA11Q86U17 422 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 TLK2Q86UE8 772 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 GPC2Q8N158 579 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 STK40Q8N2I9 435 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 MYEOVQ96EZ4 313 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 HSH2DQ96JZ2 352 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 DEPDC7Q96QD5 511 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 CENPOQ9BU64 300 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 CCDC32Q9BV29 185 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 FAM126AQ9BYI3 521 aaPredicted RBP13.81□□□□□ -0.2
SRP54-202ENST00000546080 CD244Q9BZW8 370 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 AMBNQ9NP70 447 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 OARD1Q9Y530 152 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 TRIP12Q14669 1992 aaPredicted RBP13.81□□□□□ -0.2
SRP54-202ENST00000546080 A0A0D9SEW6 157 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 CLCA1A8K7I4 914 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 CENPXA8MT69 81 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 HAS3O00219 553 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 GPR39O43194 453 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 TLR5O60602 858 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 EBLN1P0CF75 366 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 PTPN6P29350 595 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 KDELR2P33947 212 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 GPR15P49685 360 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 CDK10Q15131 360 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 ARMCX4Q5H9R4 360 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 CD300LGQ6UXG3 332 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 DNAJC22Q8N4W6 341 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 OR7G1Q8NGA0 311 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 GGHQ92820 318 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 CDCA5Q96FF9 252 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 TSSK3Q96PN8 268 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 KCNC2Q96PR1 638 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 GABARAPL3Q9BY60 117 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 P2RY12Q9H244 342 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 FBXO44Q9H4M3 255 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 ZNF408Q9H9D4 720 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 PLCXD1Q9NUJ7 323 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 C14orf119Q9NWQ9 140 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 GPRC5BQ9NZH0 403 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 SPASTQ9UBP0 616 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 UBA2Q9UBT2 640 aaPredicted RBP13.81□□□□□ -0.2
SRP54-202ENST00000546080 BTBD3Q9Y2F9 522 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 DLGAP4Q9Y2H0 992 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 GRIP1Q9Y3R0 1128 aa13.81□□□□□ -0.2
SRP54-202ENST00000546080 SLC12A8A0AV02 714 aa13.8□□□□□ -0.2
SRP54-202ENST00000546080 LOC730098B7Z3J9 87 aa13.8□□□□□ -0.2
SRP54-202ENST00000546080 PRLP01236 227 aa13.8□□□□□ -0.2
SRP54-202ENST00000546080 ADORA3P0DMS8 318 aa13.8□□□□□ -0.2
SRP54-202ENST00000546080 RGS4P49798 205 aa13.8□□□□□ -0.2
SRP54-202ENST00000546080 VMACQ2NL98 169 aa13.8□□□□□ -0.2
SRP54-202ENST00000546080 BCL7AQ4VC05 210 aa13.8□□□□□ -0.2
SRP54-202ENST00000546080 PRAMEF19Q5SWL8 479 aa13.8□□□□□ -0.2
SRP54-202ENST00000546080 PTRHD1Q6GMV3 140 aaKnown RBP13.8□□□□□ -0.2
SRP54-202ENST00000546080 Q6ZPB1 254 aaPredicted RBP13.8□□□□□ -0.2
SRP54-202ENST00000546080 EIF3MQ7L2H7 374 aaKnown RBP13.8□□□□□ -0.2
SRP54-202ENST00000546080 CCDC190Q86UF4 302 aa13.8□□□□□ -0.2
SRP54-202ENST00000546080 GALNT12Q8IXK2 581 aa13.8□□□□□ -0.2
SRP54-202ENST00000546080 OR8H2Q8N162 312 aa13.8□□□□□ -0.2
SRP54-202ENST00000546080 TCAIMQ8N3R3 496 aa13.8□□□□□ -0.2
SRP54-202ENST00000546080 STX19Q8N4C7 294 aa13.8□□□□□ -0.2
SRP54-202ENST00000546080 OR7D4Q8NG98 312 aa13.8□□□□□ -0.2
SRP54-202ENST00000546080 USP7Q93009 1102 aa13.8□□□□□ -0.2
SRP54-202ENST00000546080 PSKH2Q96QS6 385 aa13.8□□□□□ -0.2
SRP54-202ENST00000546080 ERVK13-1Q9NX77 482 aa13.8□□□□□ -0.2
SRP54-202ENST00000546080 E9PQ18 207 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 CA12O43570 354 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 ITGB1P05556 798 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 HSMCR30P0CW71 290 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 HOXD9P28356 352 aaPredicted RBP13.79□□□□□ -0.2
SRP54-202ENST00000546080 KRT6CP48668 564 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 RACK1P63244 317 aaKnown RBP13.79□□□□□ -0.2
SRP54-202ENST00000546080 OLR1P78380 273 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 MRPS6P82932 125 aaKnown RBP13.79□□□□□ -0.2
SRP54-202ENST00000546080 STARD3Q14849 445 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 LRRC26Q2I0M4 334 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 TTC23LQ6PF05 361 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 ZNF517Q6ZMY9 492 aaPredicted RBP13.79□□□□□ -0.2
SRP54-202ENST00000546080 GPR142Q7Z601 462 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 ZSWIM9Q86XI8 627 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 CFAP52Q8N1V2 620 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 PGBD3Q8N328 593 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 PAF1Q8N7H5 531 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 NELL1Q92832 810 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms