RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 A0A1W2PPV9 198 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 TOX3O15405 576 aaPredicted RBP15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 SHOX2O60902 331 aaPredicted RBP15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 CLDN9O95484 217 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 PROS1P07225 676 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 TGM1P22735 817 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 ACP1P24666 158 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 CCNG1P51959 295 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 DAB2P98082 770 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 ARL13AQ5H913 290 aaPredicted RBP15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 WDR74Q6RFH5 385 aaPredicted RBP15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 CRLF3Q8IUI8 442 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 PLXDC1Q8IUK5 500 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 EID2Q8N6I1 236 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 SNX31Q8N9S9 440 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 OR4E2Q8NGC2 313 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 AGAP11Q8TF27 550 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 ATP6V1E2Q96A05 226 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 ZUFSPQ96AP4 578 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 REPS1Q96D71 796 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 PTCD3Q96EY7 689 aaKnown RBP15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 ZDHHC12Q96GR4 267 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 IL17FQ96PD4 163 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 SARGQ9BW04 601 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 PITPNM3Q9BZ71 974 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 NSRP1Q9H0G5 558 aaKnown RBP15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 SMOC1Q9H4F8 434 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 NT5DC2Q9H857 520 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 HRASLS2Q9NWW9 162 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 POMT2Q9UKY4 750 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 SNX7Q9UNH6 387 aa15.46■□□□□ 0.07
PRPF40A-212ENST00000545856 TRBV23OR9-2A0A075B6M9 112 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 IGHV1OR21-1A0A087WYE8 117 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 POLR3GO15318 223 aaPredicted RBP15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 WFS1O76024 890 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 CHEK2O96017 543 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 CKMT2P17540 419 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 AMD1P17707 334 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 LSP1P33241 339 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 IRF8Q02556 426 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 TRAF3Q13114 568 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 SF3A2Q15428 464 aaKnown RBP15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 CCDC6Q16204 474 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 RBBP7Q16576 425 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 SPESP1Q6UW49 350 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 ZCCHC23Q6ZST2 131 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 SPRED1Q7Z699 444 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 CUZD1Q86UP6 607 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 OR2L3Q8NG85 312 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 BAHD1Q8TBE0 780 aaPredicted RBP15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 PIWIL2Q8TC59 973 aaKnown RBP15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 PYCR2Q96C36 320 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 CHMP6Q96FZ7 201 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 OR4K3Q96R72 315 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 NOL11Q9H8H0 719 aaKnown RBP15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 ACTR8Q9H981 624 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 ZBTB26Q9HCK0 441 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 TMEM184CQ9NVA4 438 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 ACTR10Q9NZ32 417 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 FTSJ1Q9UET6 329 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 VTI1BQ9UEU0 232 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 TAC3Q9UHF0 121 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 ADGRE2Q9UHX3 823 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 PLAGL1Q9UM63 463 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 PPT2Q9UMR5 302 aa15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 MN1Q10571 1320 aaPredicted RBP15.45■□□□□ 0.06
PRPF40A-212ENST00000545856 LY6G6EA0A0G2JKS1 128 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 OR6C74A6NCV1 312 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 ISM1B1AKI9 464 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 BTN3A3O00478 584 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 TNFSF14O43557 240 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 EDF1O60869 148 aaKnown RBP15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 LDOC1O95751 146 aaPredicted RBP15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 UROSP10746 265 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 CD59P13987 128 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 GRK3P35626 688 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 GDF5P43026 501 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 RPL14P50914 215 aaKnown RBP15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 CCR8P51685 355 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 FASTKQ14296 549 aaKnown RBP15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 HIST2H2ACQ16777 129 aaPredicted RBP15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 HIST2H2AA3Q6FI13 130 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 NXPE4Q6UWF7 544 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 MILR1Q7Z6M3 343 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 KMT5CQ86Y97 462 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 NAXDQ8IW45 347 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 WDR75Q8IWA0 830 aaKnown RBP15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 CLYBLQ8N0X4 340 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 KRT78Q8N1N4 520 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 TTLQ8NG68 377 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 OR4K1Q8NGD4 311 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 RHBDD1Q8TEB9 315 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 TRPC4APQ8TEL6 797 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 AHCYL2Q96HN2 611 aaKnown RBP15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 ZNF317Q96PQ6 595 aaPredicted RBP15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 AIF1LQ9BQI0 150 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 MRPS30Q9NP92 439 aaKnown RBP15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 MID1IP1Q9NPA3 183 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 PARD6AQ9NPB6 346 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 SEMA4BQ9NPR2 832 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms