RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 ITIH1P19827 911 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 LHCGRP22888 699 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 MAPK10P53779 464 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 PPP1R8Q12972 351 aaKnown RBP13.09□□□□□ -0.31
PPME1-208ENST00000543525 CSTF3Q12996 717 aaKnown RBP13.09□□□□□ -0.31
PPME1-208ENST00000543525 MTAPQ13126 283 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 OR4F3Q6IEY1 312 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 XKR5Q6UX68 686 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 CYP2U1Q7Z449 544 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 RBM23Q86U06 439 aaKnown RBP13.09□□□□□ -0.31
PPME1-208ENST00000543525 SYT12Q8IV01 421 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 C10orf111Q8N326 155 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 PGBD3Q8N328 593 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 SMYD1Q8NB12 490 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 DDHD1Q8NEL9 900 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 AUTS2Q8WXX7 1259 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 ZNF566Q969W8 418 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 LMLNQ96KR4 655 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 CEP44Q9C0F1 390 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 TRIT1Q9H3H1 467 aaKnown RBP13.09□□□□□ -0.31
PPME1-208ENST00000543525 BRD9Q9H8M2 597 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 PALMDQ9NP74 551 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 SPG21Q9NZD8 308 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 BAG5Q9UL15 447 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 SLC22A14Q9Y267 594 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 KIAA1671Q9BY89 1806 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 GRM6O15303 877 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 HTR1AP08908 422 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 ZNF12P17014 697 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 AGXTP21549 392 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 ITPKAP23677 461 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 IGFBP5P24593 272 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 POLR2LP62875 67 aaKnown RBP13.09□□□□□ -0.31
PPME1-208ENST00000543525 IL5RAQ01344 420 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 CHIT1Q13231 466 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 KCNC3Q14003 757 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 ZXDCQ2QGD7 858 aaPredicted RBP13.09□□□□□ -0.31
PPME1-208ENST00000543525 TBC1D25Q3MII6 688 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 LIPJQ5W064 366 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 CPZQ66K79 652 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 OR2T5Q6IEZ7 315 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 ZCCHC8Q6NZY4 707 aaKnown RBP13.09□□□□□ -0.31
PPME1-208ENST00000543525 RFLNAQ6ZTI6 216 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 GAREM2Q75VX8 874 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 OR2T29Q8NH02 315 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 FBLIM1Q8WUP2 373 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 SGCDQ92629 289 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 TANKQ92844 425 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 PYCR2Q96C36 320 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 FBXL8Q96CD0 374 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 PLEKHA8Q96JA3 519 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 RAD21L1Q9H4I0 556 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 LTB4R2Q9NPC1 389 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 AASDHPPTQ9NRN7 309 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.09□□□□□ -0.31
PPME1-208ENST00000543525 B4GALT6Q9UBX8 382 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 NAALAD2Q9Y3Q0 740 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 HSPE1-MOB4S4R3N1 261 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 U3KQV3 271 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 SZT2Q5T011 3432 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 CARNS1A5YM72 827 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 LEFTY2O00292 366 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 CLIC1O00299 241 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 UGDHO60701 494 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 CLPXO76031 633 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 MYO1DO94832 1006 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 EPN2O95208 641 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 UGT2B4P06133 528 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 LAG3P18627 525 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 CDK5R2Q13319 367 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 SLC44A4Q53GD3 710 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 LAIR2Q6ISS4 152 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 CNKSR3Q6P9H4 555 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 C16orf87Q6PH81 154 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 ZNF554Q86TJ5 538 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 VRK3Q8IV63 474 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 PIK3C3Q8NEB9 887 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 GIPC3Q8TF64 312 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 STARD8Q92502 1023 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 VOPP1Q96AW1 172 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 PANX1Q96RD7 426 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 P2RY13Q9BPV8 354 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 IL1RAPQ9NPH3 570 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 FAM120CQ9NX05 1096 aaKnown RBP13.08□□□□□ -0.32
PPME1-208ENST00000543525 TMPRSS11EQ9UL52 423 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 ERVW-1Q9UQF0 538 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 PLXNB3Q9ULL4 1909 aa13.08□□□□□ -0.32
PPME1-208ENST00000543525 A0A1W2PPC1 479 aa13.07□□□□□ -0.32
PPME1-208ENST00000543525 ZNF99A8MXY4 864 aaPredicted RBP13.07□□□□□ -0.32
PPME1-208ENST00000543525 MAGEB3O15480 346 aa13.07□□□□□ -0.32
PPME1-208ENST00000543525 CBFA2T3O75081 653 aa13.07□□□□□ -0.32
PPME1-208ENST00000543525 AP2A2O94973 939 aa13.07□□□□□ -0.32
PPME1-208ENST00000543525 LRG1P02750 347 aa13.07□□□□□ -0.32
PPME1-208ENST00000543525 CYP2A6P11509 494 aaPredicted RBP13.07□□□□□ -0.32
PPME1-208ENST00000543525 ENGP17813 658 aa13.07□□□□□ -0.32
PPME1-208ENST00000543525 DNAJA1P31689 397 aaKnown RBP13.07□□□□□ -0.32
PPME1-208ENST00000543525 IRF8Q02556 426 aa13.07□□□□□ -0.32
PPME1-208ENST00000543525 CREMQ03060 361 aa13.07□□□□□ -0.32
PPME1-208ENST00000543525 GTF2H3Q13889 308 aa13.07□□□□□ -0.32
PPME1-208ENST00000543525 KEAP1Q14145 624 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms