RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 ISLR2Q6UXK2 745 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 SHISA6Q6ZSJ9 500 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 OTOAQ7RTW8 1153 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 SLC13A5Q86YT5 568 aaPredicted RBP11.33□□□□□ -0.6
PTPN6-219ENST00000542848 SLC34A3Q8N130 599 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 TRIM58Q8NG06 486 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 MAGEC3Q8TD91 643 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 GRHL3Q8TE85 626 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 FAR1Q8WVX9 515 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 THOC3Q96J01 351 aaKnown RBP11.33□□□□□ -0.6
PTPN6-219ENST00000542848 FOPNLQ96NB1 174 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 LZTFL1Q9NQ48 299 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 TREX1Q9NSU2 369 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 PAK5Q9P286 719 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 MARCH4Q9P2E8 410 aaPredicted RBP11.33□□□□□ -0.6
PTPN6-219ENST00000542848 CTSFQ9UBX1 484 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 ZNF282Q9UDV7 671 aaPredicted RBP11.33□□□□□ -0.6
PTPN6-219ENST00000542848 TTC7AQ9ULT0 858 aaPredicted RBP11.33□□□□□ -0.6
PTPN6-219ENST00000542848 FAM169AQ9Y6X4 670 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 ABCA12Q86UK0 2595 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 APCP25054 2843 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 LRRTM2O43300 516 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 NDUFS3O75489 264 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 HPP00738 406 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 ZGLP1P0C6A0 271 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 NPY2RP49146 381 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 EMP3P54852 163 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 PER3P56645 1201 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 GNG11P61952 73 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 KLC1Q07866 573 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 Q0VFX4 171 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 MFAP5Q13361 173 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 ATG9BQ674R7 924 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 FRMPD2BQ6IN97 320 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 FBXO42Q6P3S6 717 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 C4orf22Q6V702 233 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 TICAM1Q8IUC6 712 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 CCDC89Q8N998 374 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 OR2L3Q8NG85 312 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 OR2A1Q8NGT9 310 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 STT3BQ8TCJ2 826 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 SKA2Q8WVK7 121 aaPredicted RBP11.32□□□□□ -0.6
PTPN6-219ENST00000542848 C1orf54Q8WWF1 131 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 MIEF2Q96C03 454 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 CNDP1Q96KN2 507 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 MIPEPQ99797 713 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 CRB3Q9BUF7 120 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 IL22Q9GZX6 179 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 EIF2B3Q9NR50 452 aaKnown RBP11.32□□□□□ -0.6
PTPN6-219ENST00000542848 BFARQ9NZS9 450 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 SPATA7Q9P0W8 599 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 ZC3H7BQ9UGR2 993 aaKnown RBP11.32□□□□□ -0.6
PTPN6-219ENST00000542848 NFS1Q9Y697 457 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 MAU2Q9Y6X3 613 aa11.32□□□□□ -0.6
PTPN6-219ENST00000542848 IGLV3-12A0A075B6K2 115 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 LOC105369274A0A096LPK9 316 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 LOC102723532A0A0G2JNH3 316 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 A0A0J9YVX5 310 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 A0A0U1RQJ8 604 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 A0A1W2PPV9 198 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 E2F3O00716 465 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 MAP2K7O14733 419 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 PHF2O75151 1096 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 KLHL18O94889 574 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 MED26O95402 600 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 MATN4O95460 622 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 ACPPP15309 386 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 PSMB5P28074 263 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 RPL22P35268 128 aaKnown RBP11.31□□□□□ -0.6
PTPN6-219ENST00000542848 BDKRB1P46663 353 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 SESN2P58004 480 aaPredicted RBP11.31□□□□□ -0.6
PTPN6-219ENST00000542848 SNX1Q13596 522 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 MUM1Q2TAK8 710 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 CCSMST1Q4G0I0 132 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 RNF44Q7L0R7 432 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 NDUFAF7Q7L592 441 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 PRUNE1Q86TP1 453 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 KBTBD2Q8IY47 623 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 OR4N4Q8N0Y3 316 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 DTWD1Q8N5C7 304 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 METTL27Q8N6F8 245 aaPredicted RBP11.31□□□□□ -0.6
PTPN6-219ENST00000542848 ZFYVE21Q9BQ24 234 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 C3orf18Q9UK00 162 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 GUCA1BQ9UMX6 200 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 CDC14AQ9UNH5 594 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 OSGIN2Q9Y236 505 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 DRG1Q9Y295 367 aaKnown RBP11.31□□□□□ -0.6
PTPN6-219ENST00000542848 CAPN6Q9Y6Q1 641 aa11.31□□□□□ -0.6
PTPN6-219ENST00000542848 A0A1B0GUH1 482 aa11.3□□□□□ -0.6
PTPN6-219ENST00000542848 OR2A25A4D2G3 310 aa11.3□□□□□ -0.6
PTPN6-219ENST00000542848 CTAGE9A4FU28 777 aa11.3□□□□□ -0.6
PTPN6-219ENST00000542848 H3BMM5 538 aa11.3□□□□□ -0.6
PTPN6-219ENST00000542848 PCDH17O14917 1159 aa11.3□□□□□ -0.6
PTPN6-219ENST00000542848 PFDN6O15212 129 aa11.3□□□□□ -0.6
PTPN6-219ENST00000542848 USP1O94782 785 aa11.3□□□□□ -0.6
PTPN6-219ENST00000542848 EIF2S1P05198 315 aaKnown RBP11.3□□□□□ -0.6
PTPN6-219ENST00000542848 ERVK-10P10266 1014 aa11.3□□□□□ -0.6
PTPN6-219ENST00000542848 FDXRP22570 491 aa11.3□□□□□ -0.6
PTPN6-219ENST00000542848 NMBRP28336 390 aa11.3□□□□□ -0.6
PTPN6-219ENST00000542848 ATP5DP30049 168 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 278.7 ms