RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 SLCO3A1Q9UIG8 710 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 MBD1Q9UIS9 605 aaPredicted RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 SAMD4AQ9UPU9 718 aaKnown RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 CCL26Q9Y258 94 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 ATP11BQ9Y2G3 1177 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 IRAK3Q9Y616 596 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 CROCCQ5TZA2 2017 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 A0A1B0GVG6 124 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 UPK3BL1B0FP48 263 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 UPK3BL2E5RIL1 263 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 NEDD8-MDP1E9PL57 170 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 RFXANKO14593 260 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 CCNDBP1O95273 360 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 SERPINA1P01009 418 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 TACR1P25103 407 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 CA8P35219 290 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 CTBSQ01459 385 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 CHIT1Q13231 466 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 PMS2P3Q13401 168 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 IL18R1Q13478 541 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 PLCL1Q15111 1095 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 BROXQ5VW32 411 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 NOXRED1Q6NXP6 359 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 ERICH5Q6P6B1 374 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 SERPINA13PQ6UXR4 307 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 KCTD8Q6ZWB6 473 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 DET1Q7L5Y6 550 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 GPR155Q7Z3F1 870 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 HIPK1Q86Z02 1210 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 SKA2Q8WVK7 121 aaPredicted RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 ELMO1Q92556 727 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 C12orf43Q96C57 262 aaKnown RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 PYURFQ96I23 114 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 APOLD1Q96LR9 279 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 BEGAINQ9BUH8 593 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 BBS2Q9BXC9 721 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 ING2Q9H160 280 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 SPHK2Q9NRA0 654 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 SPATA6Q9NWH7 488 aaPredicted RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 FAM118AQ9NWS6 357 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 FAM120CQ9NX05 1096 aaKnown RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 ETAA1Q9NY74 926 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 DKK3Q9UBP4 350 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 EBF1Q9UH73 591 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 CD84Q9UIB8 345 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 C3orf18Q9UK00 162 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 MAPRE3Q9UPY8 281 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 ERVW-1Q9UQF0 538 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 SLC22A14Q9Y267 594 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 GMEB1Q9Y692 573 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 H0YIV9 168 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 H3BMQ9 156 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 CCL16O15467 120 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 CXCL14O95715 111 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 MYCP01106 439 aaPredicted RBP6.35□□□□□ -1.39
PTPRO-208ENST00000542557 TYRP14679 529 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 DCTP40126 519 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 HNF4AP41235 474 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 HALP42357 657 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 CDKN2CP42773 168 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 RPS6KA3P51812 740 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 NEK2P51955 445 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 IRF8Q02556 426 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 TOP3AQ13472 1001 aaPredicted RBP6.35□□□□□ -1.39
PTPRO-208ENST00000542557 TUBA3CQ13748 450 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 E2F2Q14209 437 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 ZNF77Q15935 545 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 DUOXA1Q1HG43 343 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 ARHGAP15Q53QZ3 475 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 LDLRAP1Q5SW96 308 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 DPPA4Q7L190 304 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 HSD11B1LQ7Z5J1 315 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 RAVER1Q8IY67 606 aaKnown RBP6.35□□□□□ -1.39
PTPRO-208ENST00000542557 C10orf111Q8N326 155 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 CPA6Q8N4T0 437 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 ZNF555Q8NEP9 628 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 OR8J2Q8NGG1 315 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 OR13F1Q8NGS4 319 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 WDR20Q8TBZ3 569 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 FRS2Q8WU20 508 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 CLP1Q92989 425 aaKnown RBP6.35□□□□□ -1.39
PTPRO-208ENST00000542557 PYCR2Q96C36 320 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 OTUB2Q96DC9 234 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 LRIG1Q96JA1 1093 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 MRGPRX3Q96LB0 322 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 COG8Q96MW5 612 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 ARPC5LQ9BPX5 153 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 INPP5KQ9BT40 448 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 SPATA9Q9BWV2 254 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 THG1LQ9NWX6 298 aaKnown RBP6.35□□□□□ -1.39
PTPRO-208ENST00000542557 TBC1D14Q9P2M4 693 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 CIDEBQ9UHD4 219 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 BLOC1S6Q9UL45 172 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 RUVBL1Q9Y265 456 aaKnown RBP6.35□□□□□ -1.39
PTPRO-208ENST00000542557 AP1M2Q9Y6Q5 423 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 MTCL1Q9Y4B5 1905 aaKnown RBP6.35□□□□□ -1.39
PTPRO-208ENST00000542557 ARHGEF33A8MVX0 844 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 EVPLLA8MZ36 301 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 GNGT2O14610 69 aa6.35□□□□□ -1.39
PTPRO-208ENST00000542557 SLC16A6O15403 523 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms