RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PPP1R14CQ8TAE6 165 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 MDM1Q8TC05 714 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 TGM7Q96PF1 710 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 TMEM237Q96Q45 408 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 OR4K3Q96R72 315 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 MECRQ9BV79 373 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 MRPS30Q9NP92 439 aaKnown RBP22.28■■□□□ 1.16
HOMER3-205ENST00000542541 H2AFYO75367 372 aaKnown RBP22.28■■□□□ 1.16
HOMER3-205ENST00000542541 C9P02748 559 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 RPS17P08708 135 aaKnown RBP22.28■■□□□ 1.16
HOMER3-205ENST00000542541 HRH2P25021 359 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 PSMB5P28074 263 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 GTF2H2Q13888 395 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 CCDC157Q569K6 752 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 GTF2H2CQ6P1K8 395 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 OR4D9Q8NGE8 314 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 FLVCR1-AS1Q8TAF5 88 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 C1GALT1Q9NS00 363 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 INTS9Q9NV88 658 aaKnown RBP22.28■■□□□ 1.16
HOMER3-205ENST00000542541 PCTPQ9UKL6 214 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 APOBEC2Q9Y235 224 aaKnown RBP22.28■■□□□ 1.16
HOMER3-205ENST00000542541 ASB1Q9Y576 335 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 MN1Q10571 1320 aaPredicted RBP22.27■■□□□ 1.16
HOMER3-205ENST00000542541 ASXL3Q9C0F0 2248 aa22.27■■□□□ 1.16
HOMER3-205ENST00000542541 WDR91A4D1P6 747 aa22.27■■□□□ 1.16
HOMER3-205ENST00000542541 TLCD2A6NGC4 264 aa22.27■■□□□ 1.16
HOMER3-205ENST00000542541 LRRC14BA6NHZ5 514 aa22.27■■□□□ 1.16
HOMER3-205ENST00000542541 CHN1P15882 459 aa22.27■■□□□ 1.16
HOMER3-205ENST00000542541 CDH3P22223 829 aa22.27■■□□□ 1.16
HOMER3-205ENST00000542541 CFHR1Q03591 330 aa22.27■■□□□ 1.16
HOMER3-205ENST00000542541 UNC50Q53HI1 259 aa22.27■■□□□ 1.16
HOMER3-205ENST00000542541 NUDT22Q9BRQ3 303 aa22.27■■□□□ 1.16
HOMER3-205ENST00000542541 ATXN7L1Q9ULK2 861 aaPredicted RBP22.27■■□□□ 1.16
HOMER3-205ENST00000542541 CEP250Q9BV73 2442 aa22.26■■□□□ 1.15
HOMER3-205ENST00000542541 A0A0J9YY10 115 aa22.26■■□□□ 1.15
HOMER3-205ENST00000542541 CLGNO14967 610 aa22.26■■□□□ 1.15
HOMER3-205ENST00000542541 TOX3O15405 576 aaPredicted RBP22.26■■□□□ 1.15
HOMER3-205ENST00000542541 CSF2RBP32927 897 aa22.26■■□□□ 1.15
HOMER3-205ENST00000542541 FAM92BQ6ZTR7 304 aa22.26■■□□□ 1.15
HOMER3-205ENST00000542541 GOLGA7Q7Z5G4 137 aa22.26■■□□□ 1.15
HOMER3-205ENST00000542541 ALYREFQ86V81 257 aaKnown RBP22.26■■□□□ 1.15
HOMER3-205ENST00000542541 TRIM42Q8IWZ5 723 aa22.26■■□□□ 1.15
HOMER3-205ENST00000542541 ZNF483Q8TF39 744 aaPredicted RBP22.26■■□□□ 1.15
HOMER3-205ENST00000542541 SLC5A11Q8WWX8 675 aa22.26■■□□□ 1.15
HOMER3-205ENST00000542541 ZUFSPQ96AP4 578 aa22.26■■□□□ 1.15
HOMER3-205ENST00000542541 RTKNQ9BST9 563 aa22.26■■□□□ 1.15
HOMER3-205ENST00000542541 PITPNM3Q9BZ71 974 aa22.26■■□□□ 1.15
HOMER3-205ENST00000542541 IPPKQ9H8X2 491 aa22.26■■□□□ 1.15
HOMER3-205ENST00000542541 TOR4AQ9NXH8 423 aa22.26■■□□□ 1.15
HOMER3-205ENST00000542541 SNX7Q9UNH6 387 aa22.26■■□□□ 1.15
HOMER3-205ENST00000542541 RP1P56715 2156 aa22.26■■□□□ 1.15
HOMER3-205ENST00000542541 MAP3K7O43318 606 aa22.25■■□□□ 1.15
HOMER3-205ENST00000542541 RASSF9O75901 435 aa22.25■■□□□ 1.15
HOMER3-205ENST00000542541 NOVA1P51513 510 aaKnown RBP22.25■■□□□ 1.15
HOMER3-205ENST00000542541 GFERP55789 205 aa22.25■■□□□ 1.15
HOMER3-205ENST00000542541 PPP1CAP62136 330 aa22.25■■□□□ 1.15
HOMER3-205ENST00000542541 SIM1P81133 766 aaPredicted RBP22.25■■□□□ 1.15
HOMER3-205ENST00000542541 CLCQ05315 142 aa22.25■■□□□ 1.15
HOMER3-205ENST00000542541 RSPO4Q2I0M5 234 aaPredicted RBP22.25■■□□□ 1.15
HOMER3-205ENST00000542541 FAM76AQ8TAV0 307 aa22.25■■□□□ 1.15
HOMER3-205ENST00000542541 DYDC1Q8WWB3 177 aa22.25■■□□□ 1.15
HOMER3-205ENST00000542541 NEIL2Q969S2 332 aa22.25■■□□□ 1.15
HOMER3-205ENST00000542541 ATP6V1E2Q96A05 226 aa22.25■■□□□ 1.15
HOMER3-205ENST00000542541 CNDP1Q96KN2 507 aa22.25■■□□□ 1.15
HOMER3-205ENST00000542541 GATA5Q9BWX5 397 aaPredicted RBP22.25■■□□□ 1.15
HOMER3-205ENST00000542541 SEMA6CQ9H3T2 930 aa22.25■■□□□ 1.15
HOMER3-205ENST00000542541 PDP2Q9P2J9 529 aa22.25■■□□□ 1.15
HOMER3-205ENST00000542541 STK38LQ9Y2H1 464 aa22.25■■□□□ 1.15
HOMER3-205ENST00000542541 D6RAR5 112 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 MLYCDO95822 493 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 HOXB3P14651 431 aaPredicted RBP22.24■■□□□ 1.15
HOMER3-205ENST00000542541 GRK2P25098 689 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 SERPINB5P36952 375 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 CACHD1Q5VU97 1274 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 KIAA1614Q5VZ46 1190 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 MAP3K3Q99759 626 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 DPH7Q9BTV6 452 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 TRMOQ9BU70 441 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 NOL11Q9H8H0 719 aaKnown RBP22.24■■□□□ 1.15
HOMER3-205ENST00000542541 SEMA4BQ9NPR2 832 aaPredicted RBP22.24■■□□□ 1.15
HOMER3-205ENST00000542541 TMEM184CQ9NVA4 438 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 ANKMY1Q9P2S6 941 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 KLHL3Q9UH77 587 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 PCNX2A6NKB5 2137 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 SPAARA0A1B0GVQ0 90 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 FTH1P19P0C7X4 201 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 FGF3P11487 239 aaPredicted RBP22.24■■□□□ 1.15
HOMER3-205ENST00000542541 ATP1A2P50993 1020 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 CDH13P55290 713 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 PCDH1Q08174 1060 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 CHI3L2Q15782 390 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 RBM44Q6ZP01 1051 aaKnown RBP22.24■■□□□ 1.15
HOMER3-205ENST00000542541 PRSS42Q7Z5A4 293 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 ABHD11Q8NFV4 315 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 RAB3IL1Q8TBN0 382 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 NSUN5Q96P11 429 aaKnown RBP22.24■■□□□ 1.15
HOMER3-205ENST00000542541 EHD1Q9H4M9 534 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 KLK4Q9Y5K2 254 aa22.24■■□□□ 1.15
HOMER3-205ENST00000542541 GIPC1O14908 333 aa22.23■■□□□ 1.15
HOMER3-205ENST00000542541 CASC3O15234 703 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms