RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 FSD1LQ9BXM9 530 aa7.8□□□□□ -1.16
PDLIM5-221ENST00000542407 ACE2Q9BYF1 805 aaPredicted RBP7.8□□□□□ -1.16
PDLIM5-221ENST00000542407 MAGEH1Q9H213 219 aa7.8□□□□□ -1.16
PDLIM5-221ENST00000542407 ZBTB26Q9HCK0 441 aa7.8□□□□□ -1.16
PDLIM5-221ENST00000542407 TRIM39Q9HCM9 518 aa7.8□□□□□ -1.16
PDLIM5-221ENST00000542407 MRPL17Q9NRX2 175 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-221ENST00000542407 ZNF275Q9NSD4 429 aaPredicted RBP7.8□□□□□ -1.16
PDLIM5-221ENST00000542407 CCDC167Q9P0B6 97 aa7.8□□□□□ -1.16
PDLIM5-221ENST00000542407 DNMT3BQ9UBC3 853 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-221ENST00000542407 EGFL7Q9UHF1 273 aa7.8□□□□□ -1.16
PDLIM5-221ENST00000542407 PCDHGA7Q9Y5G6 932 aa7.8□□□□□ -1.16
PDLIM5-221ENST00000542407 MIA3Q5JRA6 1907 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 MROH6A6NGR9 719 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 ACOD1A6NK06 481 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 DLGAP1O14490 977 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 NUAK1O60285 661 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 TRIM13O60858 407 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 BCAS1O75363 584 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 OR7A10O76100 309 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 IFNA16P05015 189 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 CTSAP10619 480 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 ARSAP15289 507 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 TFEBP19484 476 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 RRM2P31350 389 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 CTNNB1P35222 781 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 SPRP35270 261 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 PPM1AP35813 382 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 OR3A3P47888 321 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 RPL14P50914 215 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 DLG2Q15700 870 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 ADGRF1Q5T601 910 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 SLX4IPQ5VYV7 408 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 IL31Q6EBC2 164 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 KIAA0930Q6ICG6 404 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 LILRA6Q6PI73 481 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 CNSTQ6PJW8 725 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 OTOP2Q7RTS6 562 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 KDELC2Q7Z4H8 507 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 SPPL2CQ8IUH8 684 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 P3H2Q8IVL5 708 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 FAM217AQ8IXS0 508 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 ZNF619Q8N2I2 560 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 ANKFN1Q8N957 763 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 PDPRQ8NCN5 879 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 OR13J1Q8NGT2 312 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 TRIB3Q96RU7 358 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 MGME1Q9BQP7 344 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 MENTQ9BUN1 341 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 RMND5AQ9H871 391 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 CAB39LQ9H9S4 337 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 SCUBE2Q9NQ36 999 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 RPS6KA6Q9UK32 745 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 INVSQ9Y283 1065 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 V9GYQ6 96 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 DENND4CQ5VZ89 1909 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 TMEM233B4DJY2 109 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 PRRG1O14668 218 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 TGM5O43548 720 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 KDELR3O43731 214 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 CLDN11O75508 207 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 CD160O95971 181 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 S100A9P06702 114 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 CNPP09543 421 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 GDI1P31150 447 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 GLRBP48167 497 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 RPIAP49247 311 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 PGGT1BP53609 377 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 PLA2G16P53816 162 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 KCNJ10P78508 379 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 IRF9Q00978 393 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 FPGSQ05932 587 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 ABRQ12979 859 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 AQP6Q13520 282 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 LRIT3Q3SXY7 679 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 SLC36A3Q495N2 470 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 AGKQ53H12 422 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 ARL13AQ5H913 290 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 SIRPB2Q5JXA9 342 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 OTUD3Q5T2D3 398 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 SLC6A19Q695T7 634 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 NECAB2Q7Z6G3 386 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 EPHX4Q8IUS5 362 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 CCDC103Q8IW40 242 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 OR52N1Q8NH53 320 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 FIG4Q92562 907 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 VPS39Q96JC1 886 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 CYP2S1Q96SQ9 504 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 C1QTNF1Q9BXJ1 281 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 GON7Q9BXV9 100 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 RPRD1BQ9NQG5 326 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 ITM2CQ9NQX7 267 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 UXTQ9UBK9 157 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 SUCOQ9UBS9 1254 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 ZDHHC2Q9UIJ5 367 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 SNX7Q9UNH6 387 aa7.79□□□□□ -1.16
PDLIM5-221ENST00000542407 A0A1B0GVM2 712 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 A0A1W2PQ72 361 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 M0R3G1 203 aa7.78□□□□□ -1.16
PDLIM5-221ENST00000542407 NADKO95544 446 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms