RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 KCNS3Q9BQ31 491 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 TIMMDC1Q9NPL8 285 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 SDR39U1Q9NRG7 319 aaPredicted RBP15.68■□□□□ 0.1
VARS2-212ENST00000542001 HCFC1R1Q9NWW0 138 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 LEFTY1O75610 366 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 PRPS2P11908 318 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 SEC13P55735 322 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 C22orf39Q6P5X5 142 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 PARGQ86W56 976 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 TRIM69Q86WT6 500 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 ERI1Q8IV48 349 aaKnown RBP15.67■□□□□ 0.1
VARS2-212ENST00000542001 CSGALNACT1Q8TDX6 532 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 KLHL3Q9UH77 587 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 RING1Q06587 406 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 DNASE1L3Q13609 305 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 C2orf27AQ580R0 203 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 FAM91A1Q658Y4 838 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 DCAF4L2Q8NA75 395 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 MTIF3Q9H2K0 278 aaKnown RBP15.67■□□□□ 0.1
VARS2-212ENST00000542001 FBXO10Q9UK96 956 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 ENTPD4Q9Y227 616 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 ANGPT4Q9Y264 503 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 PCDHB3Q9Y5E6 796 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 DYTNA2CJ06 578 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 ZNF195O14628 629 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 STX16O14662 325 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 AIREO43918 545 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 CD36P16671 472 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 DGKGP49619 791 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 CCR4P51679 360 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 BLVRAP53004 296 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 THOC6Q86W42 341 aaKnown RBP15.67■□□□□ 0.1
VARS2-212ENST00000542001 FAM129CQ86XR2 697 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 CROCCP3Q8IVE0 287 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 HSH2DQ96JZ2 352 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 ASB1Q9Y576 335 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 DOCK3Q8IZD9 2030 aa15.67■□□□□ 0.1
VARS2-212ENST00000542001 UBR3Q6ZT12 1888 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 NPIPB15A6NHN6 443 aaPredicted RBP15.66■□□□□ 0.1
VARS2-212ENST00000542001 LEFTY2O00292 366 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 LATO43561 262 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 VIPP01282 170 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 MYL12AP19105 171 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 HMGCLP35914 325 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 ALDH3A2P51648 485 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 TMEM236Q5W0B7 351 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 OR2T5Q6IEZ7 315 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 KIAA1324Q6UXG2 1013 aaKnown RBP15.66■□□□□ 0.1
VARS2-212ENST00000542001 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.66■□□□□ 0.1
VARS2-212ENST00000542001 OR2T29Q8NH02 315 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 HM13Q8TCT9 377 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 C1GALT1C1Q96EU7 318 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 MAGEE1Q9HCI5 957 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 IL17CQ9P0M4 197 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 MALT1Q9UDY8 824 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 COL5A3P25940 1745 aaPredicted RBP15.66■□□□□ 0.1
VARS2-212ENST00000542001 GSRP00390 522 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 SBK3P0C264 359 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 AGXTP21549 392 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 CAP1Q01518 475 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 LSAMPQ13449 338 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 TOP3AQ13472 1001 aaPredicted RBP15.66■□□□□ 0.1
VARS2-212ENST00000542001 GPR33Q49SQ1 333 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.66■□□□□ 0.1
VARS2-212ENST00000542001 PIWIL3Q7Z3Z3 882 aaKnown RBP15.66■□□□□ 0.1
VARS2-212ENST00000542001 UBXN10Q96LJ8 280 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 GPR78Q96P69 363 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 DUS2Q9NX74 493 aaKnown RBP15.66■□□□□ 0.1
VARS2-212ENST00000542001 C5AR2Q9P296 337 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 PCDHGA11Q9Y5H2 935 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 FAM186AA6NE01 2351 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 M0R129 80 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 TNFRSF10BO14763 440 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 HOXD9P28356 352 aaPredicted RBP15.66■□□□□ 0.1
VARS2-212ENST00000542001 KLHL12Q53G59 568 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 RNASE12Q5GAN4 147 aaKnown RBP15.66■□□□□ 0.1
VARS2-212ENST00000542001 COLEC12Q5KU26 742 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 PDZK1Q5T2W1 519 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 SNX29P2Q8IUI4 249 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 PHYKPLQ8IUZ5 450 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 OR5K1Q8NHB7 308 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 SLC9A6Q92581 669 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 TMEM125Q96AQ2 219 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 APIPQ96GX9 242 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 CCDC3Q9BQI4 270 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 FNDC11Q9BVV2 318 aa15.66■□□□□ 0.1
VARS2-212ENST00000542001 BOLA2-SMG1P6H3BVE0 249 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 GMFGO60234 142 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 ERN1O75460 977 aaKnown RBP15.65■□□□□ 0.1
VARS2-212ENST00000542001 ACP5P13686 325 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 PPM1AP35813 382 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 KRT20P35900 424 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 TAS2R50P59544 299 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 ILF2Q12905 390 aaKnown RBP15.65■□□□□ 0.1
VARS2-212ENST00000542001 NOXRED1Q6NXP6 359 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 MINDY1Q8N5J2 469 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 KCT2Q8NC54 265 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 LEMD2Q8NC56 503 aa15.65■□□□□ 0.1
VARS2-212ENST00000542001 GLB1L3Q8NCI6 653 aaPredicted RBP15.65■□□□□ 0.1
VARS2-212ENST00000542001 OR8D1Q8WZ84 308 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms