RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 NRBP1Q9UHY1 535 aa3.8□□□□□ -1.8
RAP1B-224ENST00000541216 CPSF3Q9UKF6 684 aaKnown RBP3.8□□□□□ -1.8
RAP1B-224ENST00000541216 GRID1Q9ULK0 1009 aa3.8□□□□□ -1.8
RAP1B-224ENST00000541216 MRPS28Q9Y2Q9 187 aaKnown RBP3.8□□□□□ -1.8
RAP1B-224ENST00000541216 ARPC2O15144 300 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 GGPS1O95749 300 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 CCR10P46092 362 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 BMXP51813 675 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 RAD23AP54725 363 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 UBASH3AP57075 661 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 RRS1Q15050 365 aaKnown RBP3.79□□□□□ -1.8
RAP1B-224ENST00000541216 NPTX1Q15818 432 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 CTU2Q2VPK5 515 aaKnown RBP3.79□□□□□ -1.8
RAP1B-224ENST00000541216 KRBOX4Q5JUW0 171 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 KRT80Q6KB66 452 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 Q6ZSR9 355 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 TTC30BQ8N4P2 665 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 ZNF248Q8NDW4 579 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 OR5AP2Q8NGF4 316 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 OR10Q1Q8NGQ4 319 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 RMDN1Q96DB5 314 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 FAM71F1Q96KD3 344 aaPredicted RBP3.79□□□□□ -1.8
RAP1B-224ENST00000541216 SLC25A23Q9BV35 468 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 SLC2A11Q9BYW1 496 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 FZD8Q9H461 694 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 ERVMER34-1Q9H9K5 563 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 CCDC177Q9NQR7 707 aaPredicted RBP3.79□□□□□ -1.8
RAP1B-224ENST00000541216 FAM207AQ9NSI2 230 aaPredicted RBP3.79□□□□□ -1.8
RAP1B-224ENST00000541216 PLCXD1Q9NUJ7 323 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 RASAL2Q9UJF2 1139 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 PPP2R2CQ9Y2T4 447 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 TSPOAP1O95153 1857 aa3.79□□□□□ -1.8
RAP1B-224ENST00000541216 O00370 1275 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 TCERG1O14776 1098 aaKnown RBP3.78□□□□□ -1.8
RAP1B-224ENST00000541216 AP5Z1O43299 807 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 TIMM44O43615 452 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 DIAPH2O60879 1101 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 GLRA3O75311 464 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 ATP6AP2O75787 350 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 SAGP10523 405 aaPredicted RBP3.78□□□□□ -1.8
RAP1B-224ENST00000541216 DARSP14868 501 aaKnown RBP3.78□□□□□ -1.8
RAP1B-224ENST00000541216 EEF1DP29692 281 aaKnown RBP3.78□□□□□ -1.8
RAP1B-224ENST00000541216 VAMP7P51809 220 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 COG2Q14746 738 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 HYAL4Q2M3T9 481 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 SLC35D3Q5M8T2 416 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 UGT3A1Q6NUS8 523 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 LACC1Q8IV20 430 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 LGI2Q8N0V4 545 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 LSMEM2Q8N112 164 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 ANKRD13CQ8N6S4 541 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 Q8NFD4 153 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 OR4K1Q8NGD4 311 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 VANGL1Q8TAA9 524 aaPredicted RBP3.78□□□□□ -1.8
RAP1B-224ENST00000541216 MRGPRDQ8TDS7 321 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 SUSD6Q92537 303 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 VPS33AQ96AX1 596 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 THOC1Q96FV9 657 aaKnown RBP3.78□□□□□ -1.8
RAP1B-224ENST00000541216 ART5Q96L15 291 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 NAA11Q9BSU3 229 aaPredicted RBP3.78□□□□□ -1.8
RAP1B-224ENST00000541216 BARHL2Q9NY43 387 aa3.78□□□□□ -1.8
RAP1B-224ENST00000541216 TOPBP1Q92547 1522 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 CDK2AP2O75956 126 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 VTNP04004 478 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 ZNF883P0CG24 379 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 IRF2P14316 349 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 CSTF2P33240 577 aaKnown RBP eCLIP3.77□□□□□ -1.81
RAP1B-224ENST00000541216 RPL21P46778 160 aaKnown RBP3.77□□□□□ -1.81
RAP1B-224ENST00000541216 LEPRP48357 1165 aaKnown RBP3.77□□□□□ -1.81
RAP1B-224ENST00000541216 KLC1Q07866 573 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 CAMK2DQ13557 499 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 TCTE1Q5JU00 501 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 KRT39Q6A163 491 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 SLC25A47Q6Q0C1 308 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 TMEM207Q6UWW9 146 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 ZNF497Q6ZNH5 498 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 BTN2A1Q7KYR7 527 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 TLK2Q86UE8 772 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 CAMKVQ8NCB2 501 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 OR1L3Q8NH93 324 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 AZIN2Q96A70 460 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 ZNF558Q96NG5 402 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 PITPNM3Q9BZ71 974 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 FAM129AQ9BZQ8 928 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 TBC1D7Q9P0N9 293 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 EPHA6Q9UF33 1036 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 TNNQ9UQP3 1299 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 LIPGQ9Y5X9 500 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 CFTRP13569 1480 aa3.77□□□□□ -1.81
RAP1B-224ENST00000541216 CEP170Q5SW79 1584 aa3.76□□□□□ -1.81
RAP1B-224ENST00000541216 PEG3Q9GZU2 1588 aa3.76□□□□□ -1.81
RAP1B-224ENST00000541216 C2CD4DB7Z1M9 353 aa3.76□□□□□ -1.81
RAP1B-224ENST00000541216 DKC1O60832 514 aaKnown RBP eCLIP3.76□□□□□ -1.81
RAP1B-224ENST00000541216 RECQL5O94762 991 aaPredicted RBP3.76□□□□□ -1.81
RAP1B-224ENST00000541216 SERPINB2P05120 415 aa3.76□□□□□ -1.81
RAP1B-224ENST00000541216 CCDC175P0C221 793 aa3.76□□□□□ -1.81
RAP1B-224ENST00000541216 EEF1B2P24534 225 aaKnown RBP3.76□□□□□ -1.81
RAP1B-224ENST00000541216 HSPA1LP34931 641 aa3.76□□□□□ -1.81
RAP1B-224ENST00000541216 VEGFCP49767 419 aa3.76□□□□□ -1.81
RAP1B-224ENST00000541216 ERVK11-1P61568 191 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms