RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 MN1Q10571 1320 aaPredicted RBP16.11■□□□□ 0.17
UBC-208ENST00000540700 LRRK2Q5S007 2527 aa16.11■□□□□ 0.17
UBC-208ENST00000540700 IGHV5-10-1A0A0J9YXX1 117 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 RGS16O15492 202 aaPredicted RBP16.1■□□□□ 0.17
UBC-208ENST00000540700 CPNE6O95741 557 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 THRAP10827 490 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 UGT2B7P16662 529 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 AP1S2P56377 157 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 CDKL1Q00532 357 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 ZFP36L1Q07352 338 aaKnown RBP16.1■□□□□ 0.17
UBC-208ENST00000540700 CLN3Q13286 438 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 ANKS6Q68DC2 871 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 IRGCQ6NXR0 463 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 TMEM71Q6P5X7 295 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 WDR74Q6RFH5 385 aaPredicted RBP16.1■□□□□ 0.17
UBC-208ENST00000540700 AGTRAPQ6RW13 159 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 FAM92BQ6ZTR7 304 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 BANPQ8N9N5 519 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 PDPRQ8NCN5 879 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 RHEBL1Q8TAI7 183 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 STAG3L4Q8TBR4 150 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 ESAMQ96AP7 390 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 ARL8AQ96BM9 186 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 PYCR2Q96C36 320 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 RAB33BQ9H082 229 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 EPB41L1Q9H4G0 881 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 PDP2Q9P2J9 529 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 KLHL3Q9UH77 587 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 POMT2Q9UKY4 750 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 RNF112Q9ULX5 631 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 SH2B3Q9UQQ2 575 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 ENTPD2Q9Y5L3 495 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 TEX15Q9BXT5 2789 aa16.1■□□□□ 0.17
UBC-208ENST00000540700 PIPSLA2A3N6 862 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 GSAPA4D1B5 854 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 NRP2O60462 931 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 PRAMEF10O60809 474 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 SPAG7O75391 227 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 TNFSF15O95150 251 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 PVRP15151 417 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 PRDX3P30048 256 aaKnown RBP16.09■□□□□ 0.17
UBC-208ENST00000540700 CRHR1P34998 444 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 AGTR2P50052 363 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 TBPL1P62380 186 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 NAE1Q13564 534 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 SPIDRQ14159 915 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 ARHGAP19Q14CB8 494 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 TSNAXIP1Q2TAA8 658 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 COLEC12Q5KU26 742 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 FRA10AC1Q70Z53 315 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 HDXQ7Z353 690 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 RCBTB1Q8NDN9 531 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 OR56A3Q8NH54 315 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 PGM2Q96G03 612 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 PRR11Q96HE9 360 aaPredicted RBP16.09■□□□□ 0.17
UBC-208ENST00000540700 SCYL1Q96KG9 808 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 CCDC74BQ96LY2 380 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 OR4K3Q96R72 315 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 MAP3K3Q99759 626 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 RAB11FIP5Q9BXF6 653 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 CENPHQ9H3R5 247 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 MKS1Q9NXB0 559 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 CPSF2Q9P2I0 782 aaKnown RBP16.09■□□□□ 0.17
UBC-208ENST00000540700 KLHL20Q9Y2M5 609 aa16.09■□□□□ 0.17
UBC-208ENST00000540700 AHCTF1Q8WYP5 2266 aa16.08■□□□□ 0.17
UBC-208ENST00000540700 IGHV5-51A0A0C4DH38 117 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 LRRC14BA6NHZ5 514 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 SUPT3HB4E1H0 165 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 AGRPO00253 132 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 KLK8O60259 260 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 SUPT3HO75486 399 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 HIST1H2AGP0C0S8 130 aaPredicted RBP16.08■□□□□ 0.16
UBC-208ENST00000540700 HIST1H2ADP20671 130 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 GDF5P43026 501 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 SLC6A12P48065 614 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 PPM1FP49593 454 aaPredicted RBP16.08■□□□□ 0.16
UBC-208ENST00000540700 SNAP47Q5SQN1 464 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 IGF2-ASQ6U949 168 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 SPESP1Q6UW49 350 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 RBM44Q6ZP01 1051 aaKnown RBP16.08■□□□□ 0.16
UBC-208ENST00000540700 SYTL1Q8IYJ3 562 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 OR4D9Q8NGE8 314 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 OR2A1Q8NGT9 310 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 TLCD1Q96CP7 247 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 APOPT1Q96IL0 206 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 HIST1H2AHQ96KK5 128 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 CCNL2Q96S94 520 aaPredicted RBP16.08■□□□□ 0.16
UBC-208ENST00000540700 HIST1H2AJQ99878 128 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 EGFL8Q99944 293 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 SH3GL2Q99962 352 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 H2AFJQ9BTM1 129 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 ACAT2Q9BWD1 397 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 SGPP1Q9BX95 441 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 KLHL25Q9H0H3 589 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 VIPAS39Q9H9C1 493 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 ABCF3Q9NUQ8 709 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 INTS7Q9NVH2 962 aaKnown RBP16.08■□□□□ 0.16
UBC-208ENST00000540700 NUDT4Q9NZJ9 180 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 SEMA5BQ9P283 1151 aa16.08■□□□□ 0.16
UBC-208ENST00000540700 LNPEPQ9UIQ6 1025 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms