RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 HS3ST5Q8IZT8 346 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 OR11H4Q8NGC9 324 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 ADAMTS19Q8TE59 1207 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 DCAF4Q8WV16 495 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 ADAMTS14Q8WXS8 1223 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 ROPN1LQ96C74 230 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 HS6ST2Q96MM7 605 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 GALNT9Q9HCQ5 603 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 ABCB8Q9NUT2 735 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 OXSMQ9NWU1 459 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 MTMR10Q9NXD2 777 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 TPRKBQ9Y3C4 175 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 MTF2Q9Y483 593 aaPredicted RBP9.22□□□□□ -0.93
CLIP1-214ENST00000540539 SPATA31C2B4DYI2 1134 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 M0R082 166 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 FXYD1O00168 92 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 VEGFDO43915 354 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 MMP20O60882 483 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 PRSS23O95084 383 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 RLN2P04090 185 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 FBP1P09467 338 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 PSMA2P25787 234 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 RYKP34925 604 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 PGDP52209 483 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 BACE1P56817 501 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 RAPSNQ13702 412 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 PTPRCAPQ14761 206 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 SMAD1Q15797 465 aaKnown RBP9.22□□□□□ -0.93
CLIP1-214ENST00000540539 EML3Q32P44 896 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 ASPRV1Q53RT3 343 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 SAXO2Q658L1 398 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 DARS2Q6PI48 645 aaKnown RBP9.22□□□□□ -0.93
CLIP1-214ENST00000540539 KLHL17Q6TDP4 642 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 RBMS3Q6XE24 437 aaKnown RBP9.22□□□□□ -0.93
CLIP1-214ENST00000540539 IFNEQ86WN2 208 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 OR6C4Q8NGE1 309 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 GPR151Q8TDV0 419 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 GMCL1Q96IK5 515 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 QRFPRQ96P65 431 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 GFM1Q96RP9 751 aaKnown RBP9.22□□□□□ -0.93
CLIP1-214ENST00000540539 EBNA1BP2Q99848 306 aaKnown RBP9.22□□□□□ -0.93
CLIP1-214ENST00000540539 WDR77Q9BQA1 342 aaPredicted RBP9.22□□□□□ -0.93
CLIP1-214ENST00000540539 TRMOQ9BU70 441 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 VAT1LQ9HCJ6 419 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 TMEM8AQ9HCN3 771 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 IL1RAPQ9NPH3 570 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 PRMT8Q9NR22 394 aaPredicted RBP9.22□□□□□ -0.93
CLIP1-214ENST00000540539 IMPAD1Q9NX62 359 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 ERAP1Q9NZ08 941 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 KIF25Q9UIL4 384 aa9.22□□□□□ -0.93
CLIP1-214ENST00000540539 TCRBV16S1A1N1A0A5B0 115 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 ZNF729A6NN14 1252 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-214ENST00000540539 MPTX1A8MV57 137 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 PLA2G10O15496 165 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 RECQL5O94762 991 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-214ENST00000540539 FAM13AO94988 1023 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 APRTP07741 180 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 SSTR2P30874 369 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 SOX6P35712 828 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 ACTR1BP42025 376 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 DGKZQ13574 1117 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 TEAD4Q15561 434 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 DLEU7Q6UYE1 221 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 RAB11FIP2Q7L804 512 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 OR1M1Q8NGA1 313 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 FEZF2Q8TBJ5 459 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 MRGPRX2Q96LB1 330 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 FRMD8P1Q9BZ68 369 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-214ENST00000540539 LMAN2LQ9H0V9 348 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 OR51E2Q9H255 320 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 SMURF1Q9HCE7 757 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 DYRK4Q9NR20 520 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 GTSE1Q9NYZ3 720 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 MAP10Q9P2G4 905 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 ASH2LQ9UBL3 628 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 TJP2Q9UDY2 1190 aa9.21□□□□□ -0.93
CLIP1-214ENST00000540539 SCAMP1O15126 338 aa9.21□□□□□ -0.94
CLIP1-214ENST00000540539 RPLP0P05388 317 aaKnown RBP9.21□□□□□ -0.94
CLIP1-214ENST00000540539 APOA4P06727 396 aa9.21□□□□□ -0.94
CLIP1-214ENST00000540539 FHP07954 510 aa9.21□□□□□ -0.94
CLIP1-214ENST00000540539 UMPSP11172 480 aa9.21□□□□□ -0.94
CLIP1-214ENST00000540539 EDN3P14138 238 aa9.21□□□□□ -0.94
CLIP1-214ENST00000540539 ARSBP15848 533 aa9.21□□□□□ -0.94
CLIP1-214ENST00000540539 ATP5F1P24539 256 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-214ENST00000540539 EIF2S3P41091 472 aaKnown RBP9.21□□□□□ -0.94
CLIP1-214ENST00000540539 KCNJ3P48549 501 aa9.21□□□□□ -0.94
CLIP1-214ENST00000540539 HNMTP50135 292 aa9.21□□□□□ -0.94
CLIP1-214ENST00000540539 RNF144AP50876 292 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-214ENST00000540539 ZNF81P51508 661 aa9.21□□□□□ -0.94
CLIP1-214ENST00000540539 NAGLUP54802 743 aa9.21□□□□□ -0.94
CLIP1-214ENST00000540539 HMGCS2P54868 508 aa9.21□□□□□ -0.94
CLIP1-214ENST00000540539 RAB25P57735 213 aa9.21□□□□□ -0.94
CLIP1-214ENST00000540539 SPCS3P61009 180 aa9.21□□□□□ -0.94
CLIP1-214ENST00000540539 ERVK-25P63136 954 aa9.21□□□□□ -0.94
CLIP1-214ENST00000540539 SOX4Q06945 474 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-214ENST00000540539 SERTAD2Q14140 314 aa9.21□□□□□ -0.94
CLIP1-214ENST00000540539 EMC2Q15006 297 aa9.21□□□□□ -0.94
CLIP1-214ENST00000540539 RIMKLAQ8IXN7 391 aa9.21□□□□□ -0.94
CLIP1-214ENST00000540539 MYCT1Q8N699 235 aa9.21□□□□□ -0.94
CLIP1-214ENST00000540539 ZNF540Q8NDQ6 660 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms