RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 ZFYVE21Q9BQ24 234 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 CRB3Q9BUF7 120 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 EPS8L2Q9H6S3 715 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 AGPAT4Q9NRZ5 378 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 C14orf105Q9NVL8 296 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 INTS10Q9NVR2 710 aaKnown RBP8.27□□□□□ -1.09
DDB1-212ENST00000538470 SYBUQ9NX95 663 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 UTP6Q9NYH9 597 aaKnown RBP8.27□□□□□ -1.09
DDB1-212ENST00000538470 CTSFQ9UBX1 484 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 CIDEBQ9UHD4 219 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 NFS1Q9Y697 457 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 MYO9AB2RTY4 2548 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 IGLV3-12A0A075B6K2 115 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 HYKKA2RU49 373 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 VSTM2BA6NLU5 285 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 E5RI56 91 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 MAP2K7O14733 419 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 NIPSNAP2O75323 286 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 PSIP1O75475 530 aaKnown RBP8.26□□□□□ -1.09
DDB1-212ENST00000538470 VAPBO95292 243 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 MATN4O95460 622 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 CBX6O95503 412 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 HPP00738 406 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 CATP04040 527 aaKnown RBP8.26□□□□□ -1.09
DDB1-212ENST00000538470 FBLP22087 321 aaKnown RBP8.26□□□□□ -1.09
DDB1-212ENST00000538470 FDXRP22570 491 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 TSFMP43897 325 aaKnown RBP8.26□□□□□ -1.09
DDB1-212ENST00000538470 CCZ1BP86790 482 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 CCZ1P86791 482 aaPredicted RBP8.26□□□□□ -1.09
DDB1-212ENST00000538470 OCA2Q04671 838 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 KCNJ11Q14654 390 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 NR6A1Q15406 480 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 PRTGQ2VWP7 1150 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 TTLL9Q3SXZ7 439 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 CCSMST1Q4G0I0 132 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 ANKRD20A4Q4UJ75 823 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 C4orf17Q53FE4 359 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 CRB2Q5IJ48 1285 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.26□□□□□ -1.09
DDB1-212ENST00000538470 WASHC2DQ5SRD0 308 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 KIRREL2Q6UWL6 708 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 NEK10Q6ZWH5 1172 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 CUZD1Q86UP6 607 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 CILP2Q8IUL8 1156 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 C2orf73Q8N5S3 287 aaPredicted RBP8.26□□□□□ -1.09
DDB1-212ENST00000538470 FBXO15Q8NCQ5 510 aaPredicted RBP8.26□□□□□ -1.09
DDB1-212ENST00000538470 ST6GALNAC3Q8NDV1 305 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 OR11G2Q8NGC1 345 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 OR9A1PQ8NGU1 263 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 SMPDL3AQ92484 453 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 MFSD3Q96ES6 412 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 LHPPQ9H008 270 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 SOX17Q9H6I2 414 aaPredicted RBP8.26□□□□□ -1.09
DDB1-212ENST00000538470 ZNF304Q9HCX3 659 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 LZTFL1Q9NQ48 299 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 ASF1BQ9NVP2 202 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 SAMD15Q9P1V8 674 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 KLHL42Q9P2K6 505 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 ZNF282Q9UDV7 671 aaPredicted RBP8.26□□□□□ -1.09
DDB1-212ENST00000538470 CDC14AQ9UNH5 594 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 NOVA2Q9UNW9 492 aaKnown RBP8.26□□□□□ -1.09
DDB1-212ENST00000538470 RUVBL2Q9Y230 463 aaKnown RBP8.26□□□□□ -1.09
DDB1-212ENST00000538470 SLC5A6Q9Y289 635 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 COPG1Q9Y678 874 aaKnown RBP8.26□□□□□ -1.09
DDB1-212ENST00000538470 CENPEQ02224 2701 aa8.26□□□□□ -1.09
DDB1-212ENST00000538470 A0A0J9YVX5 310 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 FAM237BA0A1B0GVD1 139 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 A0A1W2PQ72 361 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 ANKUB1A6NFN9 424 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 WIPF3A6NGB9 483 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 ARHGEF33A8MVX0 844 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 TXNDC9O14530 226 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 USP1O94782 785 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 LDLRP01130 860 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 RNF224P0DH78 156 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 MLNP12872 115 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 ENO3P13929 434 aaPredicted RBP8.25□□□□□ -1.09
DDB1-212ENST00000538470 PKMP14618 531 aaKnown RBP8.25□□□□□ -1.09
DDB1-212ENST00000538470 ACPPP15309 386 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 EZRP15311 586 aaKnown RBP8.25□□□□□ -1.09
DDB1-212ENST00000538470 CHRM3P20309 590 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 RPA3P35244 121 aaPredicted RBP8.25□□□□□ -1.09
DDB1-212ENST00000538470 FOXL2P58012 376 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 AP2B1P63010 937 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 ABATP80404 500 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 RELAQ04206 551 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 KLC1Q07866 573 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 DSG2Q14126 1118 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 INAQ16352 499 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 EIF2S3LQ2VIR3 472 aaKnown RBP8.25□□□□□ -1.09
DDB1-212ENST00000538470 GARNL3Q5VVW2 1013 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 FRMPD2BQ6IN97 320 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 ISLR2Q6UXK2 745 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 MAMDC2Q7Z304 686 aaPredicted RBP8.25□□□□□ -1.09
DDB1-212ENST00000538470 LMNTD2Q8IXW0 634 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 CISD2Q8N5K1 135 aaKnown RBP8.25□□□□□ -1.09
DDB1-212ENST00000538470 PRR7Q8TB68 274 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 STT3BQ8TCJ2 826 aa8.25□□□□□ -1.09
DDB1-212ENST00000538470 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.25□□□□□ -1.09
DDB1-212ENST00000538470 KCNJ9Q92806 393 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms