RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 OR52B2Q96RD2 323 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 ELF4Q99607 663 aaPredicted RBP11.92□□□□□ -0.5
DDB1-209ENST00000537877 TWSG1Q9GZX9 223 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 CAAP1Q9H8G2 361 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 ABCF3Q9NUQ8 709 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 TMEM74BQ9NUR3 256 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 ZFP69BQ9UJL9 534 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 BTRCQ9Y297 605 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 PCDHB11Q9Y5F2 797 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 SNX11Q9Y5W9 270 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 PRAMEF33A0A0G2JMD5 474 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 SERTM1A2A2V5 107 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 E9PBE3 544 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 H0YIV9 168 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 SLC28A1O00337 649 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 FCHO1O14526 889 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 FFAR3O14843 346 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 YY2O15391 372 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 YKT6O15498 198 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 GPR42O15529 346 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 DFNA5O60443 496 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 KLHL41O60662 606 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 ULK1O75385 1050 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 CD22P20273 847 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 FASLGP48023 281 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 HTR6P50406 440 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 IRX1P78414 480 aaPredicted RBP11.92□□□□□ -0.5
DDB1-209ENST00000537877 ABATP80404 500 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 BNC1Q01954 994 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 HHEXQ03014 270 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 IFT88Q13099 833 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 GPR18Q14330 331 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 ZRSR2Q15696 482 aaKnown RBP11.92□□□□□ -0.5
DDB1-209ENST00000537877 CPSF6Q16630 551 aaKnown RBP eCLIP11.92□□□□□ -0.5
DDB1-209ENST00000537877 ZNF423Q2M1K9 1284 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 TCHHL1Q5QJ38 904 aaPredicted RBP11.92□□□□□ -0.5
DDB1-209ENST00000537877 FRG2Q64ET8 278 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 ICE2Q659A1 982 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 NXNQ6DKJ4 435 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 FOXR1Q6PIV2 292 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 IL27RAQ6UWB1 636 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 NXPE4Q6UWF7 544 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 ZNF771Q7L3S4 317 aaPredicted RBP11.92□□□□□ -0.5
DDB1-209ENST00000537877 CLNKQ7Z7G1 428 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 MTDHQ86UE4 582 aaKnown RBP11.92□□□□□ -0.5
DDB1-209ENST00000537877 PATE1Q8WXA2 126 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 REPS1Q96D71 796 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 ERP27Q96DN0 273 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 FRG2BQ96QU4 278 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 PITHD1Q9GZP4 211 aaPredicted RBP11.92□□□□□ -0.5
DDB1-209ENST00000537877 NMUR2Q9GZQ4 415 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 MYLK2Q9H1R3 596 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 SRMSQ9H3Y6 488 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 ELOVL6Q9H5J4 265 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 XKR8Q9H6D3 395 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 UCK1Q9HA47 277 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 SH2B3Q9UQQ2 575 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 PCDHGA11Q9Y5H2 935 aa11.92□□□□□ -0.5
DDB1-209ENST00000537877 ARHGEF17Q96PE2 2063 aaPredicted RBP11.91□□□□□ -0.5
DDB1-209ENST00000537877 TRBV23OR9-2A0A075B6M9 112 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 RGS14O43566 566 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 GALR2O43603 387 aaPredicted RBP11.91□□□□□ -0.5
DDB1-209ENST00000537877 PRICKLE3O43900 615 aaPredicted RBP11.91□□□□□ -0.5
DDB1-209ENST00000537877 NOBOXO60393 691 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 FKBP9O95302 570 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 CHRM5P08912 532 aaPredicted RBP11.91□□□□□ -0.5
DDB1-209ENST00000537877 LINC00032P0C843 101 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 PRR35P0CG20 571 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 CDH1P12830 882 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 HSD3B1P14060 373 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 HRH2P25021 359 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 CXCR2P25025 360 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 HSD3B2P26439 372 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 PRDX1Q06830 199 aaKnown RBP11.91□□□□□ -0.5
DDB1-209ENST00000537877 CSTF3Q12996 717 aaKnown RBP11.91□□□□□ -0.5
DDB1-209ENST00000537877 SLBPQ14493 270 aaKnown RBP eCLIP11.91□□□□□ -0.5
DDB1-209ENST00000537877 KIR2DS3Q14952 304 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 ABRAXAS2Q15018 415 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 HIST2H2ACQ16777 129 aaPredicted RBP11.91□□□□□ -0.5
DDB1-209ENST00000537877 SMU1Q2TAY7 513 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.91□□□□□ -0.5
DDB1-209ENST00000537877 HIST2H2AA3Q6FI13 130 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 OGFOD2Q6N063 350 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 MED27Q6P2C8 311 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 OGFOD3Q6PK18 319 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 TMEM26Q6ZUK4 368 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 LARP4Q71RC2 724 aaKnown RBP eCLIP11.91□□□□□ -0.5
DDB1-209ENST00000537877 TRIM46Q7Z4K8 759 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 C17orf82Q86X59 251 aaPredicted RBP11.91□□□□□ -0.5
DDB1-209ENST00000537877 ADGRF3Q8IZF5 1079 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 KRT78Q8N1N4 520 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 C2orf73Q8N5S3 287 aaPredicted RBP11.91□□□□□ -0.5
DDB1-209ENST00000537877 FITM2Q8N6M3 262 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 LMNTD1Q8N9Z9 388 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 ABHD11Q8NFV4 315 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 OR2A1Q8NGT9 310 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 SELENOMQ8WWX9 145 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 UBE2E3Q969T4 207 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 TUBGCP3Q96CW5 907 aa11.91□□□□□ -0.5
DDB1-209ENST00000537877 LOXL4Q96JB6 756 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms