RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 CLPBQ9H078 707 aa11.83□□□□□ -0.52
CPSF7-218ENST00000537641 EHD1Q9H4M9 534 aa11.83□□□□□ -0.52
CPSF7-218ENST00000537641 BPIFA1Q9NP55 256 aa11.83□□□□□ -0.52
CPSF7-218ENST00000537641 SLC6A13Q9NSD5 602 aa11.83□□□□□ -0.52
CPSF7-218ENST00000537641 PLCXD1Q9NUJ7 323 aa11.83□□□□□ -0.52
CPSF7-218ENST00000537641 IFT52Q9Y366 437 aa11.83□□□□□ -0.52
CPSF7-218ENST00000537641 PCDHB7Q9Y5E2 793 aa11.83□□□□□ -0.52
CPSF7-218ENST00000537641 ZFP37Q9Y6Q3 630 aaPredicted RBP11.83□□□□□ -0.52
CPSF7-218ENST00000537641 BPTFQ12830 3046 aa11.83□□□□□ -0.52
CPSF7-218ENST00000537641 SCN8AQ9UQD0 1980 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 MICAL3Q7RTP6 2002 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 MTMR11A4FU01 709 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 H3BNC9 293 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 ARVCFO00192 962 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 ASNA1O43681 348 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 RFPL2O75678 378 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 ZNF682O95780 498 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 GUCA1CO95843 209 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 MYCLP1P12525 358 aaPredicted RBP11.82□□□□□ -0.52
CPSF7-218ENST00000537641 EPB42P16452 691 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 ZNF24P17028 368 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 SLC6A4P31645 630 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 CTSKP43235 329 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 TRPC1P48995 793 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 PRKCDQ05655 676 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 ELP6Q0PNE2 266 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 ELAVL2Q12926 359 aaKnown RBP11.82□□□□□ -0.52
CPSF7-218ENST00000537641 VMACQ2NL98 169 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 GGTA1PQ4G0N0 100 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 CDKL4Q5MAI5 379 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 MLIPQ5VWP3 458 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 LYPLAL1Q5VWZ2 237 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 NCEH1Q6PIU2 408 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 CBLL1Q75N03 491 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 CHST9Q7L1S5 443 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 EIF3MQ7L2H7 374 aaKnown RBP11.82□□□□□ -0.52
CPSF7-218ENST00000537641 CFAP52Q8N1V2 620 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 BEND7Q8N7W2 519 aaPredicted RBP11.82□□□□□ -0.52
CPSF7-218ENST00000537641 KBTBD8Q8NFY9 601 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 RAET1EQ8TD07 263 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 C2orf15Q8WU43 125 aaKnown RBP11.82□□□□□ -0.52
CPSF7-218ENST00000537641 RPL3LQ92901 407 aaKnown RBP11.82□□□□□ -0.52
CPSF7-218ENST00000537641 CASD1Q96PB1 797 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 HHIPQ96QV1 700 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 CEP44Q9C0F1 390 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 HOXD1Q9GZZ0 328 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 REEP1Q9H902 201 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 POLE4Q9NR33 117 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 ABCB10Q9NRK6 738 aa11.82□□□□□ -0.52
CPSF7-218ENST00000537641 FARSBQ9NSD9 589 aaKnown RBP11.82□□□□□ -0.52
CPSF7-218ENST00000537641 PDP1Q9P0J1 537 aaPredicted RBP11.82□□□□□ -0.52
CPSF7-218ENST00000537641 MYO1GB0I1T2 1018 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 LOC730098B7Z3J9 87 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 H7C4K7 107 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 SNPHO15079 494 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 AIREO43918 545 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 TLR5O60602 858 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 WBP4O75554 376 aaKnown RBP11.81□□□□□ -0.52
CPSF7-218ENST00000537641 CLDN9O95484 217 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 C9P02748 559 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 LCKP06239 509 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 PXNP49023 591 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-218ENST00000537641 SLC11A2P49281 568 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 ARPP19P56211 112 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 LHX8Q68G74 356 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 FUT10Q6P4F1 479 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 DOK6Q6PKX4 331 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 AHSA2Q719I0 299 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 ZZZ3Q8IYH5 903 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 REM2Q8IYK8 340 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-218ENST00000537641 AMER2Q8N7J2 671 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 POC5Q8NA72 575 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 CLHC1Q8NHS4 586 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 APH1BQ8WW43 257 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 PROX1Q92786 737 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 MYDGFQ969H8 173 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 PYCR2Q96C36 320 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 EPYCQ99645 322 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 SEPT5Q99719 369 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-218ENST00000537641 INPP5KQ9BT40 448 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 SPATA9Q9BWV2 254 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 ACPTQ9BZG2 426 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 CIPCQ9C0C6 399 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 MARCH5Q9NX47 278 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 SAMHD1Q9Y3Z3 626 aaKnown RBP11.81□□□□□ -0.52
CPSF7-218ENST00000537641 PCDHGC4Q9Y5F7 938 aa11.81□□□□□ -0.52
CPSF7-218ENST00000537641 SERTM1A2A2V5 107 aa11.8□□□□□ -0.52
CPSF7-218ENST00000537641 ZBBXA8MT70 800 aa11.8□□□□□ -0.52
CPSF7-218ENST00000537641 FAM47E-STBD1D6RA91 191 aa11.8□□□□□ -0.52
CPSF7-218ENST00000537641 RFXANKO14593 260 aa11.8□□□□□ -0.52
CPSF7-218ENST00000537641 RGS13O14921 159 aa11.8□□□□□ -0.52
CPSF7-218ENST00000537641 DYRK3O43781 588 aa11.8□□□□□ -0.52
CPSF7-218ENST00000537641 FZD6O60353 706 aa11.8□□□□□ -0.52
CPSF7-218ENST00000537641 STK16O75716 305 aa11.8□□□□□ -0.52
CPSF7-218ENST00000537641 VNN2O95498 520 aa11.8□□□□□ -0.52
CPSF7-218ENST00000537641 DLGAP3O95886 979 aa11.8□□□□□ -0.52
CPSF7-218ENST00000537641 SLC11A1P49279 550 aa11.8□□□□□ -0.52
CPSF7-218ENST00000537641 NPRL3Q12980 569 aa11.8□□□□□ -0.52
CPSF7-218ENST00000537641 MTAPQ13126 283 aa11.8□□□□□ -0.52
CPSF7-218ENST00000537641 SMN1Q16637 294 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms