RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 GPR42O15529 346 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 PCDHGA12O60330 932 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 ESRRBO95718 433 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 NBL1P41271 181 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 OR1D5P58170 312 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 PRKAA1Q13131 559 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 CHIT1Q13231 466 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 TUBB8Q3ZCM7 444 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 VWA5B1Q5TIE3 1220 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 NKAIN2Q5VXU1 208 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 ADNP2Q6IQ32 1131 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 GUSBP11Q6P575 273 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 LCTLQ6UWM7 567 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 SLCO4C1Q6ZQN7 724 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 MILR1Q7Z6M3 343 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 PPP1R36Q96LQ0 422 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 SLC38A3Q99624 504 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 TWSG1Q9GZX9 223 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 ACTR8Q9H981 624 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 EML4Q9HC35 981 aaKnown RBP15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 SLC6A20Q9NP91 592 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 SEMA4GQ9NTN9 838 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 HAO1Q9UJM8 370 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 PADI4Q9UM07 663 aa15.1■□□□□ 0.01
SFSWAP-206ENST00000537582 ARID1BQ8NFD5 2236 aaPredicted RBP15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 KCNE1BA0A087WTH5 132 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 PIPSLA2A3N6 862 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 ZNF839A8K0R7 811 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 SKAP2O75563 359 aaPredicted RBP15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 OTCP00480 354 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 CAPN1P07384 714 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 ALPPL2P10696 532 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 UGT2B7P16662 529 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 LSSP48449 732 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 HTR6P50406 440 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 RPL14P50914 215 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 GALNT1Q10472 559 aaPredicted RBP15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 DOC2AQ14183 400 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 PDCD2Q16342 344 aaPredicted RBP15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 ZSCAN26Q16670 478 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 XKR6Q5GH73 641 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 KIAA1614Q5VZ46 1190 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 ICE2Q659A1 982 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 SCIMPQ6UWF3 145 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 RBM12BQ8IXT5 1001 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 Q8N9G6 341 aaPredicted RBP15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 SLC5A11Q8WWX8 675 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 OR2A14Q96R47 310 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 HBEGFQ99075 208 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 PHOX2BQ99453 314 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 ELAC2Q9BQ52 826 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 KLHL25Q9H0H3 589 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 STN1Q9H668 368 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 EVA1BQ9NVM1 165 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 DNAAF2Q9NVR5 837 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 HRASLS2Q9NWW9 162 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 ACTR10Q9NZ32 417 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 NCDNQ9UBB6 729 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 DCTN4Q9UJW0 460 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 BTRCQ9Y297 605 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 DYRK1BQ9Y463 629 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 TRAF6Q9Y4K3 522 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 PCDHB11Q9Y5F2 797 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 KCNE2Q9Y6J6 123 aa15.09■□□□□ 0.01
SFSWAP-206ENST00000537582 CPED1A4D0V7 1026 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 OR5K3A6NET4 321 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 LILRA5A6NI73 299 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 ZNF195O14628 629 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 KDM1AO60341 852 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 WFS1O76024 890 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 UBXN7O94888 489 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 LMNAP02545 664 aaKnown RBP15.08■□□□□ 0
SFSWAP-206ENST00000537582 GNAZP19086 355 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 CCND1P24385 295 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 ALDH4A1P30038 563 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 PKNOX1P55347 436 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 IRF8Q02556 426 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 SF1Q15637 639 aaKnown RBP15.08■□□□□ 0
SFSWAP-206ENST00000537582 CPSF6Q16630 551 aaKnown RBP eCLIP15.08■□□□□ 0
SFSWAP-206ENST00000537582 UGT3A2Q3SY77 523 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 PERM1Q5SV97 790 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 KANK2Q63ZY3 851 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 CPLX4Q7Z7G2 160 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 WDR75Q8IWA0 830 aaKnown RBP15.08■□□□□ 0
SFSWAP-206ENST00000537582 RNF175Q8N4F7 328 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 ZNF740Q8NDX6 193 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 OR2L3Q8NG85 312 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 PIWIL2Q8TC59 973 aaKnown RBP15.08■□□□□ 0
SFSWAP-206ENST00000537582 CCDC74AQ96AQ1 378 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 CCT8L2Q96SF2 557 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 NTMT1Q9BV86 223 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 EDEM2Q9BV94 578 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 DUSP23Q9BVJ7 150 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 TUBB1Q9H4B7 451 aa15.08■□□□□ 0
SFSWAP-206ENST00000537582 FARSBQ9NSD9 589 aaKnown RBP15.08■□□□□ 0
SFSWAP-206ENST00000537582 H7BY64 318 aa15.07■□□□□ 0
SFSWAP-206ENST00000537582 CLGNO14967 610 aa15.07■□□□□ 0
SFSWAP-206ENST00000537582 AZIN1O14977 448 aa15.07■□□□□ 0
SFSWAP-206ENST00000537582 B4GAT1O43505 415 aa15.07■□□□□ 0
SFSWAP-206ENST00000537582 NUDT21O43809 227 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms