RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 CHD9Q3L8U1 2897 aa9.02□□□□□ -0.96
UBE3B-207ENST00000537063 CXCR6O00574 342 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 NFATC1O95644 943 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 MAP4P27816 1152 aaKnown RBP9.02□□□□□ -0.97
UBE3B-207ENST00000537063 CAPGP40121 348 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 TRPC1P48995 793 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 WNT3P56703 355 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 ST8SIA6P61647 398 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 IRF8Q02556 426 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 ELP6Q0PNE2 266 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 FAM78AQ5JUQ0 283 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 TBPL2Q6SJ96 375 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 C10orf111Q8N326 155 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 TMEM132CQ8N3T6 1108 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 ZNF366Q8N895 744 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 OR8J2Q8NGG1 315 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 FAM129BQ96TA1 746 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 SEPHS2Q99611 448 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 INPP5KQ9BT40 448 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 CLK4Q9HAZ1 481 aaKnown RBP9.02□□□□□ -0.97
UBE3B-207ENST00000537063 HPS4Q9NQG7 708 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 PAPOLBQ9NRJ5 636 aaKnown RBP9.02□□□□□ -0.97
UBE3B-207ENST00000537063 OBP2AQ9NY56 170 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 DMTF1Q9Y222 760 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 PCDHGA11Q9Y5H2 935 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 DEAF1O75398 565 aaPredicted RBP9.02□□□□□ -0.97
UBE3B-207ENST00000537063 HALP42357 657 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 CDKN2CP42773 168 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 BDKRB1P46663 353 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 PNLIPRP1P54315 467 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 UGT8Q16880 541 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 KRT80Q6KB66 452 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 TMEM220Q6QAJ8 160 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 ENPP6Q6UWR7 440 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 ZNF551Q7Z340 670 aaPredicted RBP9.02□□□□□ -0.97
UBE3B-207ENST00000537063 NPAS3Q8IXF0 933 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 LRRC56Q8IYG6 542 aaPredicted RBP9.02□□□□□ -0.97
UBE3B-207ENST00000537063 GRIP2Q9C0E4 1043 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 VPS29Q9UBQ0 182 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 PRKAG2Q9UGJ0 569 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 INVSQ9Y283 1065 aa9.02□□□□□ -0.97
UBE3B-207ENST00000537063 OTOL1A6NHN0 477 aaPredicted RBP9.01□□□□□ -0.97
UBE3B-207ENST00000537063 C1orf105O95561 183 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 SLC16A8O95907 504 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 ALPLP05186 524 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 VIPR2P41587 438 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 SLC6A11P48066 632 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 ALDH3A2P51648 485 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 RAE1P78406 368 aaKnown RBP9.01□□□□□ -0.97
UBE3B-207ENST00000537063 ROR2Q01974 943 aaKnown RBP9.01□□□□□ -0.97
UBE3B-207ENST00000537063 SRSF11Q05519 484 aaKnown RBP9.01□□□□□ -0.97
UBE3B-207ENST00000537063 ABHD18Q0P651 414 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 ABRQ12979 859 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 ELAVL3Q14576 367 aaKnown RBP9.01□□□□□ -0.97
UBE3B-207ENST00000537063 XKR6Q5GH73 641 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 SLC30A9Q6PML9 568 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 ADGRD2Q7Z7M1 963 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 SERPINA11Q86U17 422 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 CPA6Q8N4T0 437 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 ZFP28Q8NHY6 868 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 OR8D1Q8WZ84 308 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 SMG7Q92540 1137 aaKnown RBP9.01□□□□□ -0.97
UBE3B-207ENST00000537063 NELL1Q92832 810 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 NUS1Q96E22 293 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 APOLD1Q96LR9 279 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 RDH12Q96NR8 316 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 TSSK3Q96PN8 268 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 THUMPD3Q9BV44 507 aaKnown RBP9.01□□□□□ -0.97
UBE3B-207ENST00000537063 SGPP1Q9BX95 441 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 ZCCHC2Q9C0B9 1178 aaKnown RBP9.01□□□□□ -0.97
UBE3B-207ENST00000537063 USE1Q9NZ43 259 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 DNAJB9Q9UBS3 223 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 RUVBL1Q9Y265 456 aaKnown RBP9.01□□□□□ -0.97
UBE3B-207ENST00000537063 RNF103-CHMP3A0A140T963 221 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 C17orf113A0A1B0GUU1 675 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 ADRB3P13945 408 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 FCARP24071 287 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 PDHA2P29803 388 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 PEX19P40855 299 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 MAGEA2P43356 314 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 PLIN5Q00G26 463 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 CHRNB3Q05901 458 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 DUOXA1Q1HG43 343 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 POM121L1PQ3SYA9 428 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 C10orf62Q5T681 223 aaPredicted RBP9.01□□□□□ -0.97
UBE3B-207ENST00000537063 ISLR2Q6UXK2 745 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 SLCO4C1Q6ZQN7 724 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 PATL1Q86TB9 770 aaKnown RBP9.01□□□□□ -0.97
UBE3B-207ENST00000537063 PJA1Q8NG27 643 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 FIG4Q92562 907 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 FOXJ1Q92949 421 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 TMBIM1Q969X1 311 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 TBC1D20Q96BZ9 403 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 EGLN2Q96KS0 407 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 WRAP53Q9BUR4 548 aaKnown RBP9.01□□□□□ -0.97
UBE3B-207ENST00000537063 THG1LQ9NWX6 298 aaKnown RBP9.01□□□□□ -0.97
UBE3B-207ENST00000537063 FAM120CQ9NX05 1096 aaKnown RBP9.01□□□□□ -0.97
UBE3B-207ENST00000537063 PTTG2Q9NZH5 202 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 ADGRE2Q9UHX3 823 aa9.01□□□□□ -0.97
UBE3B-207ENST00000537063 K7ESM1 405 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms