RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 FMO4P31512 558 aa18.8■□□□□ 0.6
TNFRSF1B-204ENST00000536782 CARSP49589 748 aaKnown RBP18.8■□□□□ 0.6
TNFRSF1B-204ENST00000536782 OCA2Q04671 838 aa18.8■□□□□ 0.6
TNFRSF1B-204ENST00000536782 NAA25Q14CX7 972 aa18.8■□□□□ 0.6
TNFRSF1B-204ENST00000536782 DTWD1Q8N5C7 304 aa18.8■□□□□ 0.6
TNFRSF1B-204ENST00000536782 OR11G2Q8NGC1 345 aa18.8■□□□□ 0.6
TNFRSF1B-204ENST00000536782 MFSD3Q96ES6 412 aa18.8■□□□□ 0.6
TNFRSF1B-204ENST00000536782 BIRC8Q96P09 236 aa18.8■□□□□ 0.6
TNFRSF1B-204ENST00000536782 KIFC1Q9BW19 673 aa18.8■□□□□ 0.6
TNFRSF1B-204ENST00000536782 EPS8L2Q9H6S3 715 aa18.8■□□□□ 0.6
TNFRSF1B-204ENST00000536782 NOVA2Q9UNW9 492 aaKnown RBP18.8■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ZKSCAN5Q9Y2L8 839 aa18.8■□□□□ 0.6
TNFRSF1B-204ENST00000536782 LOC105369274A0A096LPK9 316 aa18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 LOC102723532A0A0G2JNH3 316 aa18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 A0A1W2PPV9 198 aa18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 H3BMM5 538 aa18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 EIF2S1P05198 315 aaKnown RBP18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 MGAT1P26572 445 aa18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ARNTP27540 789 aa18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 CMPK1P30085 196 aa18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 RNF187Q5TA31 235 aaPredicted RBP18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 PRMT9Q6P2P2 845 aa18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 RNF44Q7L0R7 432 aa18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 OR4N4Q8N0Y3 316 aa18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ST6GALNAC3Q8NDV1 305 aa18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 MAIP1Q8WWC4 291 aa18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 LPGAT1Q92604 370 aa18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 MIEF2Q96C03 454 aa18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 THOC3Q96J01 351 aaKnown RBP18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ZFYVE21Q9BQ24 234 aa18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 CRB3Q9BUF7 120 aa18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 SYBUQ9NX95 663 aa18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ZNF282Q9UDV7 671 aaPredicted RBP18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 TSR3Q9UJK0 312 aaKnown RBP18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ABCA12Q86UK0 2595 aa18.79■□□□□ 0.6
TNFRSF1B-204ENST00000536782 NRP2O60462 931 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 NIPSNAP2O75323 286 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 MED26O95402 600 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 MATN4O95460 622 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 CLDN1O95832 211 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ESR1P03372 595 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ZGLP1P0C6A0 271 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ERVK-10P10266 1014 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ATP5DP30049 168 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 TSFMP43897 325 aaKnown RBP18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 CDK16Q00536 496 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 KLC1Q07866 573 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 FASTKQ14296 549 aaKnown RBP18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ZNF169Q14929 603 aaPredicted RBP18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 TYSND1Q2T9J0 566 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 MUM1Q2TAK8 710 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ANKRD20A4Q4UJ75 823 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 LRRC8BQ6P9F7 803 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 CES3Q6UWW8 571 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 STT3BQ8TCJ2 826 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 CNDP1Q96KN2 507 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 TCF12Q99081 682 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 DPH7Q9BTV6 452 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ACAT2Q9BWD1 397 aa18.78■□□□□ 0.6
TNFRSF1B-204ENST00000536782 OR2A25A4D2G3 310 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 GOLGA8KD6RF30 607 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 GOLGA8TH3BQL2 631 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 MAP2K7O14733 419 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 HPP00738 406 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 FGGP02679 453 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ACPPP15309 386 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 TPSB2P20231 275 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 CHRM3P20309 590 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ADARP55265 1226 aaKnown RBP18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 CDC16Q13042 620 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 GBX1Q14549 363 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 TLR1Q15399 786 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 TPSAB1Q15661 275 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 B3GNTL1Q67FW5 361 aaPredicted RBP18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 FBXO42Q6P3S6 717 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ISLR2Q6UXK2 745 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 KCNMB4Q86W47 210 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 PRSS58Q8IYP2 241 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 OR9A1PQ8NGU1 263 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 FAM136AQ96C01 138 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 C3orf18Q9UK00 162 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 SOX13Q9UN79 622 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 CRYL1Q9Y2S2 319 aa18.77■□□□□ 0.6
TNFRSF1B-204ENST00000536782 PHF2O75151 1096 aa18.76■□□□□ 0.59
TNFRSF1B-204ENST00000536782 VPS26AO75436 327 aa18.76■□□□□ 0.59
TNFRSF1B-204ENST00000536782 FBLP22087 321 aaKnown RBP18.76■□□□□ 0.59
TNFRSF1B-204ENST00000536782 COL8A1P27658 744 aa18.76■□□□□ 0.59
TNFRSF1B-204ENST00000536782 KCNJ1P48048 391 aa18.76■□□□□ 0.59
TNFRSF1B-204ENST00000536782 EMP3P54852 163 aa18.76■□□□□ 0.59
TNFRSF1B-204ENST00000536782 YBX1P67809 324 aaKnown RBP18.76■□□□□ 0.59
TNFRSF1B-204ENST00000536782 Q0VFX4 171 aa18.76■□□□□ 0.59
TNFRSF1B-204ENST00000536782 GRHL3Q8TE85 626 aa18.76■□□□□ 0.59
TNFRSF1B-204ENST00000536782 SMPDL3AQ92484 453 aa18.76■□□□□ 0.59
TNFRSF1B-204ENST00000536782 CABS1Q96KC9 395 aa18.76■□□□□ 0.59
TNFRSF1B-204ENST00000536782 C10orf90Q96M02 699 aa18.76■□□□□ 0.59
TNFRSF1B-204ENST00000536782 LMF1Q96S06 567 aa18.76■□□□□ 0.59
TNFRSF1B-204ENST00000536782 ZNF160Q9HCG1 818 aa18.76■□□□□ 0.59
TNFRSF1B-204ENST00000536782 MRPS30Q9NP92 439 aaKnown RBP18.76■□□□□ 0.59
TNFRSF1B-204ENST00000536782 STOX2Q9P2F5 926 aaPredicted RBP18.76■□□□□ 0.59
TNFRSF1B-204ENST00000536782 CDC14AQ9UNH5 594 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms