RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 ISM1B1AKI9 464 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 E7EQ34 232 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 ZNF749O43361 778 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 HCRTR1O43613 425 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 HAUS5O94927 633 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 SKIV2L2P42285 1042 aaKnown RBP11.94□□□□□ -0.5
PRKDC-207ENST00000536483 RRADP55042 308 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 RELAQ04206 551 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 KLHL38Q2WGJ6 581 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 TTLL9Q3SXZ7 439 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 CCSMST1Q4G0I0 132 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 TLDC1Q6P9B6 456 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 ZNF572Q7Z3I7 529 aaPredicted RBP11.94□□□□□ -0.5
PRKDC-207ENST00000536483 TRIM73Q86UV7 250 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 KLHL7Q8IXQ5 586 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 RAB42Q8N4Z0 105 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 SPATA4Q8NEY3 305 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 OR2A1Q8NGT9 310 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 OR9A1PQ8NGU1 263 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 CFAP61Q8NHU2 1237 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 PROKR1Q8TCW9 393 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 C19orf60Q96EN9 201 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 SNF8Q96H20 258 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 IL17FQ96PD4 163 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 SMAD5Q99717 465 aaKnown RBP11.94□□□□□ -0.5
PRKDC-207ENST00000536483 SLC30A3Q99726 388 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 WDR83Q9BRX9 315 aaKnown RBP11.94□□□□□ -0.5
PRKDC-207ENST00000536483 DHRS4Q9BTZ2 278 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 SLC29A3Q9BZD2 475 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 FBXO6Q9NRD1 293 aaPredicted RBP11.94□□□□□ -0.5
PRKDC-207ENST00000536483 FAM114A2Q9NRY5 505 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 INTS7Q9NVH2 962 aaKnown RBP11.94□□□□□ -0.5
PRKDC-207ENST00000536483 SLC39A10Q9ULF5 831 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 CORO1CQ9ULV4 474 aaPredicted RBP11.94□□□□□ -0.5
PRKDC-207ENST00000536483 PLCL2Q9UPR0 1127 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 CACNA1DQ01668 2161 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 PCSK5Q92824 1860 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 FITM1A5D6W6 292 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 FAM187AA6NFU0 413 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 ARHGEF33A8MVX0 844 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 C9J4A7 227 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 E5RI56 91 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 TTI1O43156 1089 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 SRPX2O60687 465 aaPredicted RBP11.93□□□□□ -0.5
PRKDC-207ENST00000536483 DDAH2O95865 285 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 AHSGP02765 367 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 CATP04040 527 aaKnown RBP11.93□□□□□ -0.5
PRKDC-207ENST00000536483 ATXN8OSP0DMR3 200 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 MAGP20916 626 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 AGXTP21549 392 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 VARSP26640 1264 aaKnown RBP11.93□□□□□ -0.5
PRKDC-207ENST00000536483 COL8A1P27658 744 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 OTX2P32243 289 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 ITGA8P53708 1063 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 NAA25Q14CX7 972 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 HIF1AQ16665 826 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 PLEKHN1Q494U1 663 aaPredicted RBP11.93□□□□□ -0.5
PRKDC-207ENST00000536483 ZC3H12BQ5HYM0 836 aaKnown RBP11.93□□□□□ -0.5
PRKDC-207ENST00000536483 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.93□□□□□ -0.5
PRKDC-207ENST00000536483 TEDDM1Q5T9Z0 273 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 YOD1Q5VVQ6 348 aaPredicted RBP11.93□□□□□ -0.5
PRKDC-207ENST00000536483 FCRL6Q6DN72 434 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 LRRC8EQ6NSJ5 796 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 CNSTQ6PJW8 725 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 FIGLAQ6QHK4 219 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 CYS1Q717R9 158 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 MTERF4Q7Z6M4 381 aaKnown RBP11.93□□□□□ -0.5
PRKDC-207ENST00000536483 RAB43Q86YS6 212 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 GPR135Q8IZ08 494 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 BBOF1Q8ND07 529 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 KIF18AQ8NI77 898 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 CD200R1Q8TD46 325 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 SNRNP40Q96DI7 357 aaKnown RBP11.93□□□□□ -0.5
PRKDC-207ENST00000536483 CERS2Q96G23 380 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 CCDC68Q9H2F9 335 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 EURLQ9NYK6 297 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 MOCS1Q9NZB8 636 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 SRPK3Q9UPE1 567 aa11.93□□□□□ -0.5
PRKDC-207ENST00000536483 ZNF839A8K0R7 811 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 EFCAB8A8MWE9 144 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 ZSCAN9O15535 394 aaPredicted RBP11.92□□□□□ -0.5
PRKDC-207ENST00000536483 KLF7O75840 302 aaPredicted RBP11.92□□□□□ -0.5
PRKDC-207ENST00000536483 OR2B3O76000 313 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 CD63P08962 238 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 ERVK-10P10266 1014 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 ELK3P41970 407 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 GRIA3P42263 894 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 ARL4CP56559 192 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 MPP1Q00013 466 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 ILF2Q12905 390 aaKnown RBP11.92□□□□□ -0.5
PRKDC-207ENST00000536483 NR6A1Q15406 480 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 SF1Q15637 639 aaKnown RBP11.92□□□□□ -0.5
PRKDC-207ENST00000536483 BBS9Q3SYG4 887 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 MLIPQ5VWP3 458 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 ZNF787Q6DD87 383 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 UGT3A1Q6NUS8 523 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 MAATS1Q7Z4T9 603 aa11.92□□□□□ -0.5
PRKDC-207ENST00000536483 MCATQ8IVS2 390 aaKnown RBP11.92□□□□□ -0.5
PRKDC-207ENST00000536483 LRRC56Q8IYG6 542 aaPredicted RBP11.92□□□□□ -0.5
PRKDC-207ENST00000536483 CISD2Q8N5K1 135 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms