RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 TRMT10BQ6PF06 316 aaKnown RBP17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 HFE2Q6ZVN8 426 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 FAM156AQ8NDB6 213 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 ZFP3Q96NJ6 502 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 LDAHQ9H6V9 325 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 SRRDQ9UH36 339 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 ATRNL1Q5VV63 1379 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 TTC24A2A3L6 582 aaPredicted RBP17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 UPK3BL1B0FP48 263 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 UPK3BL2E5RIL1 263 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 ITGA10O75578 1167 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 SEMA3DO95025 777 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 PTGIRP43119 386 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 BDKRB1P46663 353 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 ARHGAP1Q07960 439 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 HYAL2Q12891 473 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 ARFRP1Q13795 201 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 SLC9B2Q86UD5 537 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 SDR16C5Q8N3Y7 309 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 OR10G2Q8NGC3 310 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 BRI3BPQ8WY22 251 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 BRD7Q9NPI1 651 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 TDP1Q9NUW8 608 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 FZD4Q9ULV1 537 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 TRIM64A6NGJ6 449 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 NPIPA5E9PKD4 350 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 SLC22A2O15244 555 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 PIK3CBP42338 1070 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 EGFLAMQ63HQ2 1017 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 DGLUCYQ7Z3D6 616 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 BANPQ8N9N5 519 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 ZNF548Q8NEK5 533 aaPredicted RBP17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 DENND1AQ8TEH3 1009 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 PAK6Q9NQU5 681 aaPredicted RBP17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 RIMKLBQ9ULI2 386 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 NPIPA1Q9UND3 350 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 ZNF536O15090 1300 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 MMP20O60882 483 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 ECI2O75521 394 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 POP7O75817 140 aaKnown RBP17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 TRAPPC6AO75865 159 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 CDKL1Q00532 357 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 COLEC12Q5KU26 742 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 ADGRD2Q7Z7M1 963 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 TTYH1Q9H313 450 aaPredicted RBP17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 FLRT1Q9NZU1 646 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 UTS2RQ9UKP6 389 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 PPM1HQ9ULR3 514 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 Q9Y3F1 56 aa17.74■□□□□ 0.43
SFSWAP-203ENST00000535236 A0A1W2PQ45 241 aaPredicted RBP17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 A0A1W2PQY0 241 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 MID1O15344 667 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 NR2C1P13056 603 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 NRIP1P48552 1158 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 OR5AK3PQ8NH89 298 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 PNPLA2Q96AD5 504 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 CDKN2AIPNLQ96HQ2 116 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 NTPCRQ9BSD7 190 aaKnown RBP17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 LRRC3Q9BY71 257 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 KAT8Q9H7Z6 458 aaKnown RBP17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 Q9N2J8 555 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 WNT6Q9Y6F9 365 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 PRAMEF33A0A0G2JMD5 474 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 PRAMEF10O60809 474 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 UNGP13051 313 aaPredicted RBP17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 ZNF30P17039 623 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 CD47Q08722 323 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 RALGPS1Q5JS13 557 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 WDR45BQ5MNZ6 344 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 CLEC12AQ5QGZ9 265 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 NIPA2Q8N8Q9 360 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 SEC61A2Q9H9S3 476 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 SLC2A4RGQ9NR83 387 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 FER1L4A9Z1Z3 1794 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 PYHIN1Q6K0P9 492 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 Q8N9G6 341 aaPredicted RBP17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 FCGR1BQ92637 280 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 GFM1Q96RP9 751 aaKnown RBP17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 TMEM209Q96SK2 561 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 DMAC2Q9NW81 257 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 C19orf25Q9UFG5 118 aaPredicted RBP17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 KIF1AQ12756 1690 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 KAT7O95251 611 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 CBSLP0DN79 551 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 CBSP35520 551 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 AKR1D1P51857 326 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 HMGCS1Q01581 520 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 RIN1Q13671 783 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 PCBP2Q15366 365 aaKnown RBP eCLIP17.73■□□□□ 0.434e-7■□□□□ 9.2
SFSWAP-203ENST00000535236 MSANTD1Q6ZTZ1 278 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 FITM2Q8N6M3 262 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 ACOT12Q8WYK0 555 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 TESCQ96BS2 214 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 ARHGAP9Q9BRR9 750 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 SNTG1Q9NSN8 517 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 LYARQ9NX58 379 aaKnown RBP17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 NR2E1Q9Y466 385 aa17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 SPIN1Q9Y657 262 aaPredicted RBP17.73■□□□□ 0.43
SFSWAP-203ENST00000535236 A0A0U1RQF3 1178 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 KHNYNO15037 678 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms