RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 HORMAD2Q8N7B1 307 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 RNF183Q96D59 192 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 PGAM5Q96HS1 289 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 PPP1R13BQ96KQ4 1090 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 SIGLEC11Q96RL6 698 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 PCYT2Q99447 389 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 MXRA8Q9BRK3 442 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 WDR83Q9BRX9 315 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 TXLNGYQ9BZA5 131 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 NFKBIL1Q9UBC1 381 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 MTRRQ9UBK8 725 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 CACNG4Q9UBN1 327 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 FBXL17Q9UF56 701 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 NDRG3Q9UGV2 375 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 ZNHIT2Q9UHR6 403 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 MTMR6Q9Y217 621 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 CCL26Q9Y258 94 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 AAR2Q9Y312 384 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 A3GALT2U3KPV4 340 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 ZNF532Q9HCE3 1301 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 TNRC6AQ8NDV7 1962 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 EVPLQ92817 2033 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 COL7A1Q02388 2944 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 A6NNC1 897 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 PPP6CO00743 305 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 SCAMP1O15126 338 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 NVLO15381 856 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 NKX2-2O95096 273 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 CLDN7O95471 211 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 GP1BAP07359 652 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 PCNAP12004 261 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 AGAP20933 346 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 HOXD9P28356 352 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 OAS2P29728 719 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 CCND2P30279 289 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 RFC1P35251 1148 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 NNMTP40261 264 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 CLCN3P51790 818 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 ELLP55199 621 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 RPS13P62277 151 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 ROR1Q01973 937 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 GHRHRQ02643 423 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 SLC10A2Q12908 348 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 CAPSQ13938 189 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 DAZAP2Q15038 168 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 SOWAHAQ2M3V2 549 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 ESCO2Q56NI9 601 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 RPUSD3Q6P087 351 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 PRPF39Q86UA1 669 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 FAM185AQ8N0U4 392 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 FBXO39Q8N4B4 442 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 SGMS2Q8NHU3 365 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 ZNF461Q8TAF7 563 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 SEPT1Q8WYJ6 367 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 ARHGEF26Q96DR7 871 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 ZC3HAV1LQ96H79 300 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 FAM118BQ9BPY3 351 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 SRSF8Q9BRL6 282 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 TUBB6Q9BUF5 446 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 QTRT1Q9BXR0 403 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 MAK16Q9BXY0 300 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 B3GNT4Q9C0J1 378 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 LHPPQ9H008 270 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 MAGEE1Q9HCI5 957 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 RANGRFQ9HD47 186 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 TMEM184CQ9NVA4 438 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 ASF1BQ9NVP2 202 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 CHORDC1Q9UHD1 332 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 PIN4Q9Y237 131 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 SESN1Q9Y6P5 492 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 RP1P56715 2156 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 ZBED9Q6R2W3 1325 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 DYSFO75923 2080 aa4.41□□□□□ -1.7
ECHDC1-223ENST00000534442 PLIN4Q96Q06 1357 aa4.4□□□□□ -1.7
ECHDC1-223ENST00000534442 ADAM20O43506 726 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 HCRTR2O43614 444 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 TSPY3P0CV98 308 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 TSPY8P0CW00 308 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 ETFAP13804 333 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 DARSP14868 501 aaKnown RBP4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 DCTDP32321 178 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 RABIFP47224 123 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 ARRB1P49407 418 aaPredicted RBP4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 PDX1P52945 283 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 ZNF91Q05481 1191 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 DRAP1Q14919 205 aaPredicted RBP4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 PCLAFQ15004 111 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 SBK1Q52WX2 424 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 DCAF10Q5QP82 559 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 C6orf10Q5SRN2 563 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 LCE3BQ5TA77 95 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 ARMC3Q5W041 872 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 LCTLQ6UWM7 567 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 CRELD2Q6UXH1 353 aaPredicted RBP4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 ZNF793Q6ZN11 406 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 DEF8Q6ZN54 512 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 CFAP77Q6ZQR2 320 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 KRT74Q7RTS7 529 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 HAPLN4Q86UW8 402 aa4.4□□□□□ -1.71
ECHDC1-223ENST00000534442 LINC00346Q8IVM7 164 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms